BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC34ZC01RM1.SCF screened BAC_end (930 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1175 293 3e-79 >3x_Contig1175 Length = 4107 Score = 293 bits (148), Expect = 3e-79 Identities = 181/188 (96%), Gaps = 3/188 (1%) Strand = Plus / Plus Query: 598 ctgtggtaaaaaatacaaaaaatgagtgtgaagtaagaaatatatgggagagctgtcagg 657 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctgtggtaaaaaatacaaaaaatgagtgtgaagtaagaaatatatgggagagctgtcagg 60 Query: 658 tatgggacgttttcgacattgcaaagaaggctgtctaaagtataaagtggacttatcaaa 717 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 61 tatgggacgttttcgacattgcaaagaaggctgtctaaagtataaagtgtacttatcaaa 120 Query: 718 agaaagactttttttgtggcggtatcggcttggtatgaaccgggagaatttctttttctt 777 ||| |||||||||||| |||||||||||| ||||||||||||| |||| |||| |||||| Sbjct: 121 agatagactttttttg-ggcggtatcggc-tggtatgaaccggcagaa-ttctctttctt 177 Query: 778 agtcttaa 785 |||||||| Sbjct: 178 agtcttaa 185 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 12,627 Number of Sequences: 1807 Number of extensions: 12627 Number of successful extensions: 84 Number of sequences better than 1.0e-20: 1 length of query: 930 length of database: 10,358,551 effective HSP length: 16 effective length of query: 914 effective length of database: 10,329,639 effective search space: 9441290046 effective search space used: 9441290046 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)