BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC34ZC02FM1.SCF screened BAC_end (927 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig985 1463 0.0 >3x_Contig985 Length = 5529 Score = 1463 bits (738), Expect = 0.0 Identities = 814/834 (97%), Gaps = 4/834 (0%) Strand = Plus / Plus Query: 87 tttctcgtgaaatcaggcttttactcaaggcagctattgcgaaaggagctctgcataaaa 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3701 tttctcgtgaaatcaggcttttactcaaggcagctattgcgaaaggagctctgcataaaa 3760 Query: 147 atgattgggatcagcagcacttaacaagagtattttcagcgaaaactaacggaaatccaa 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3761 atgattgggatcagcagcacttaacaagagtattttcagcgaaaactaacggaaatccaa 3820 Query: 207 taaactcccaggaacggctatgctgtttcttatcccctgaagaaaaaagaattatcatag 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3821 taaactcccaggaacggctatgctgtttcttatcccctgaagaaaaaagaattatcatag 3880 Query: 267 atggcatcccatatgaacaacttggcattgaacgtccaaatgtatcaacatctaaagaca 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3881 atggcatcccatatgaacaacttggcattgaacgtccaaatgtatcaacatctaaagaca 3940 Query: 327 atactaacaattaccaagtgatagatcctacttcaatagtaacagttgaaacgcagtcaa 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3941 atactaacaattaccaagtgatagatcctacttcaatagtaacagttgaaacgcagtcaa 4000 Query: 387 aggtaccaccgccgcctcctccaattgattctaggccaaccccaccatgggctcagaatg 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4001 aggtaccaccgccgcctcctccaattgattctaggccaaccccaccatgggctcagaatg 4060 Query: 447 ttagaacagcagatcctttgctaaatcagcagatgaatcccaaagaatcaccggtaccgt 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4061 ttagaacagcagatcctttgctaaatcagcagatgaatcccaaagaatcaccggtaccgt 4120 Query: 507 cagtatcgttagaatctcgaatctcaaacttgaacgcaccaagcccttcccccgtaccca 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4121 cagtatcgttagaatctcgaatctcaaacttgaacgcaccaagcccttcccccgtaccca 4180 Query: 567 agaaaatagctgctcaagatgagaaaagcaggaggctggaaaggctaaagagatttgcta 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4181 agaaaatagctgctcaagatgagaaaagcaggaggctggaaaggctaaagagatttgcta 4240 Query: 627 gtcctgaaccactaacgtcaacctctaaaagagtgaagatagacgacgacgacagctatt 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4241 gtcctgaaccactaacgtcaacctctaaaagagtgaagatagacgacgacgacagctatt 4300 Query: 687 ccgatctcaacgccatcactaacatagcttataaatttgacaagaacaagccgattgtgg 746 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 4301 ccgatctcaacgccatcactaacaaagcttataaatttgacaagaacaagccgattgtgg 4360 Query: 747 ggcattgtcaagtgttagaagaaaaatatttaagacttacttctgaaccagattcgggca 806 |||| |||||||||||||| |||||||||||||||||||||||||||||||| ||| | Sbjct: 4361 ggcaatgtcaagtgttagagaaaaaatatttaagacttacttctgaaccagatccggcaa 4420 Query: 807 aagtacgccccgttgtccattttaattaaagctcctgactggattgggaccaagtttcat 866 ||||||| |||||||||||| ||||||||||||| ||||||||||| ||||||||||||| Sbjct: 4421 aagtacg-cccgttgtccatgttaattaaagctcttgactggattgtgaccaagtttcat 4479 Query: 867 agcgggttcgagcctcttatcataatttccggtgatcagtggaaaactataagg 920 ||| |||||| | ||||||||| |||| | ||||||||| |||| |||||||| Sbjct: 4480 agc-ggttcgtg-ctcttatcagtattt-ctgtgatcagttgaaatctataagg 4530 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5567 Number of Sequences: 1807 Number of extensions: 5567 Number of successful extensions: 31 Number of sequences better than 1.0e-20: 1 length of query: 927 length of database: 10,358,551 effective HSP length: 16 effective length of query: 911 effective length of database: 10,329,639 effective search space: 9410301129 effective search space used: 9410301129 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)