BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC34ZC02FM1.SCF screened BAC_end
         (927 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig985                                                         1463   0.0  

>3x_Contig985 
          Length = 5529

 Score = 1463 bits (738), Expect = 0.0
 Identities = 814/834 (97%), Gaps = 4/834 (0%)
 Strand = Plus / Plus

                                                                        
Query: 87   tttctcgtgaaatcaggcttttactcaaggcagctattgcgaaaggagctctgcataaaa 146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3701 tttctcgtgaaatcaggcttttactcaaggcagctattgcgaaaggagctctgcataaaa 3760

                                                                        
Query: 147  atgattgggatcagcagcacttaacaagagtattttcagcgaaaactaacggaaatccaa 206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3761 atgattgggatcagcagcacttaacaagagtattttcagcgaaaactaacggaaatccaa 3820

                                                                        
Query: 207  taaactcccaggaacggctatgctgtttcttatcccctgaagaaaaaagaattatcatag 266
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3821 taaactcccaggaacggctatgctgtttcttatcccctgaagaaaaaagaattatcatag 3880

                                                                        
Query: 267  atggcatcccatatgaacaacttggcattgaacgtccaaatgtatcaacatctaaagaca 326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3881 atggcatcccatatgaacaacttggcattgaacgtccaaatgtatcaacatctaaagaca 3940

                                                                        
Query: 327  atactaacaattaccaagtgatagatcctacttcaatagtaacagttgaaacgcagtcaa 386
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3941 atactaacaattaccaagtgatagatcctacttcaatagtaacagttgaaacgcagtcaa 4000

                                                                        
Query: 387  aggtaccaccgccgcctcctccaattgattctaggccaaccccaccatgggctcagaatg 446
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4001 aggtaccaccgccgcctcctccaattgattctaggccaaccccaccatgggctcagaatg 4060

                                                                        
Query: 447  ttagaacagcagatcctttgctaaatcagcagatgaatcccaaagaatcaccggtaccgt 506
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4061 ttagaacagcagatcctttgctaaatcagcagatgaatcccaaagaatcaccggtaccgt 4120

                                                                        
Query: 507  cagtatcgttagaatctcgaatctcaaacttgaacgcaccaagcccttcccccgtaccca 566
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4121 cagtatcgttagaatctcgaatctcaaacttgaacgcaccaagcccttcccccgtaccca 4180

                                                                        
Query: 567  agaaaatagctgctcaagatgagaaaagcaggaggctggaaaggctaaagagatttgcta 626
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4181 agaaaatagctgctcaagatgagaaaagcaggaggctggaaaggctaaagagatttgcta 4240

                                                                        
Query: 627  gtcctgaaccactaacgtcaacctctaaaagagtgaagatagacgacgacgacagctatt 686
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4241 gtcctgaaccactaacgtcaacctctaaaagagtgaagatagacgacgacgacagctatt 4300

                                                                        
Query: 687  ccgatctcaacgccatcactaacatagcttataaatttgacaagaacaagccgattgtgg 746
            |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 4301 ccgatctcaacgccatcactaacaaagcttataaatttgacaagaacaagccgattgtgg 4360

                                                                        
Query: 747  ggcattgtcaagtgttagaagaaaaatatttaagacttacttctgaaccagattcgggca 806
            |||| ||||||||||||||  |||||||||||||||||||||||||||||||| |||  |
Sbjct: 4361 ggcaatgtcaagtgttagagaaaaaatatttaagacttacttctgaaccagatccggcaa 4420

                                                                        
Query: 807  aagtacgccccgttgtccattttaattaaagctcctgactggattgggaccaagtttcat 866
            ||||||| |||||||||||| ||||||||||||| ||||||||||| |||||||||||||
Sbjct: 4421 aagtacg-cccgttgtccatgttaattaaagctcttgactggattgtgaccaagtttcat 4479

                                                                  
Query: 867  agcgggttcgagcctcttatcataatttccggtgatcagtggaaaactataagg 920
            ||| |||||| | |||||||||  |||| | ||||||||| |||| ||||||||
Sbjct: 4480 agc-ggttcgtg-ctcttatcagtattt-ctgtgatcagttgaaatctataagg 4530


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5567
Number of Sequences: 1807
Number of extensions: 5567
Number of successful extensions: 31
Number of sequences better than 1.0e-20: 1
length of query: 927
length of database: 10,358,551
effective HSP length: 16
effective length of query: 911
effective length of database: 10,329,639
effective search space: 9410301129
effective search space used: 9410301129
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)