BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC34ZC06FM1.SCF screened BAC_end (913 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1216 1362 0.0 >3x_Contig1216 Length = 5132 Score = 1362 bits (687), Expect = 0.0 Identities = 744/758 (98%), Gaps = 4/758 (0%) Strand = Plus / Plus Query: 89 ccccgttatatttctgaagttttggtcgtacgatagttcacggaatacttcatactcgta 148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4160 ccccgttatatttctgaagttttggtcgtacgatagttcacggaatacttcatactcgta 4219 Query: 149 tttgagttgcgactttaatgtctctagctgaataaattcatactgtgatgtaacaccatc 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4220 tttgagttgcgactttaatgtctctagctgaataaattcatactgtgatgtaacaccatc 4279 Query: 209 gccactcggtgaagaaaggaagaatagaaggattataataaaaaatataatcctactgtt 268 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4280 gccactcggtgaagaaaggaagaatagaaggattataataaaaaatataatcctactgtt 4339 Query: 269 atctgtactcatattgggggttggggtcagcgcagtagctctggcggttgttgtcttccc 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4340 atctgtactcatattgggggttggggtcagcgcagtagctctggcggttgttgtcttccc 4399 Query: 329 ctaggatcgactattgtcagttatttaaagggtttcgatcttaacatttgatattagaaa 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4400 ctaggatcgactattgtcagttatttaaagggtttcgatcttaacatttgatattagaaa 4459 Query: 389 aaaatgtatttaaatgttttagctacagaaagaataagtgtgctgactatgaattgtacg 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4460 aaaatgtatttaaatgttttagctacagaaagaataagtgtgctgactatgaattgtacg 4519 Query: 449 aggaagaaaattacttaacggtattactcgtagcctacgcttcagaaaaggacgaattta 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4520 aggaagaaaattacttaacggtattactcgtagcctacgcttcagaaaaggacgaattta 4579 Query: 509 tgaattgagctatcaacagttagaacaaagtatttgaacatggtgcattgttataggttc 568 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4580 tgaattgagctatcaacagttagaacaaagtatttgaacatggtgcattgttataggttc 4639 Query: 569 aaagaccaattccttagtgcagataatagaattttgagttttgttattaatgtcggggtt 628 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4640 aaagaccaattccttagtgcagataatagaattttgagttttgttattaatgtcggggtt 4699 Query: 629 gagtgttaaatacttgttatatataattcagcgaaacaactactttgcattgttgaagct 688 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4700 gagtgttaaatacttgttatatataattcagcgaaacaactactttgcattgttgaagct 4759 Query: 689 caggctaccagttcatcataagtgtggcatgtgtctttttctttgatatgcgacgttatt 748 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 4760 caggctacgagttcatcataagtgtggcatgtgtctttttctttgatatgcgacgtaatt 4819 Query: 749 ccaagtattaatgtttggttaacgttcattaaacctcantgcctctataatttgtaagtt 808 |||||||||||||||| |||||||||||||||| |||| || ||||| ||||||||||| Sbjct: 4820 ccaagtattaatgttt-gttaacgttcattaaagctcagtg-ctctaatatttgtaagtt 4877 Query: 809 acccataattaacaacgtttcttcaaaacagattcatt 846 ||| ||| |||||||| |||| |||||||||| |||| Sbjct: 4878 accagtaa-taacaacg-ttctccaaaacagatccatt 4913 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7148 Number of Sequences: 1807 Number of extensions: 7148 Number of successful extensions: 53 Number of sequences better than 1.0e-20: 1 length of query: 913 length of database: 10,358,551 effective HSP length: 16 effective length of query: 897 effective length of database: 10,329,639 effective search space: 9265686183 effective search space used: 9265686183 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)