BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC34ZC12RM1.SCF screened BAC_end
         (904 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1676                                                        1396   0.0  

>3x_Contig1676 
          Length = 15800

 Score = 1396 bits (704), Expect = 0.0
 Identities = 750/763 (98%), Gaps = 2/763 (0%)
 Strand = Plus / Plus

                                                                         
Query: 48    aaagttgagtgagtattttttcattagaaaagagtgagaaaagatacaaagtgagatacc 107
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12263 aaagttgagtgagtattttttcattagaaaagagtgagaaaagatacaaagtgagatacc 12322

                                                                         
Query: 108   actatgataatgagtaggggctcgaatgcaatcagaatgctgcatcctgtcgattgcaat 167
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12323 actatgataatgagtaggggctcgaatgcaatcagaatgctgcatcctgtcgattgcaat 12382

                                                                         
Query: 168   gaaggaactggaatgtgtcgtatcatttggggttctacgcaaaagctttattaaaacaaa 227
             ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||
Sbjct: 12383 gaaggaactggaatgtgtcgtatcatttggggttctacgcaaaagctttaagaaaacaaa 12442

                                                                         
Query: 228   ggtctcacctttccgtataacaagctcatgtgcgtcacggcagatcacttatctatcgga 287
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12443 ggtctcacctttccgtataacaagctcatgtgcgtcacggcagatcacttatctatcgga 12502

                                                                         
Query: 288   tccaaagctaaatatggcaaatcctctgcactattaaccgtcacttttgcatcagtcagg 347
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12503 tccaaagctaaatatggcaaatcctctgcactattaaccgtcacttttgcatcagtcagg 12562

                                                                         
Query: 348   ttatgttttcattgaaaagaaactgaaaaattaatgatttctcgttgtatagcaaaataa 407
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12563 ttatgttttcattgaaaagaaactgaaaaattaatgatttctcgttgtatagcaaaataa 12622

                                                                         
Query: 408   ataggattttgcgaccagccaattttgtatattaacaggagttaccttgagatgcctttt 467
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12623 ataggattttgcgaccagccaattttgtatattaacaggagttaccttgagatgcctttt 12682

                                                                         
Query: 468   taccattggctagccatcaattcatcccaaacgtagtagttccacctacatgttcaagga 527
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12683 taccattggctagccatcaattcatcccaaacgtagtagttccacctacatgttcaagga 12742

                                                                         
Query: 528   aagattactcaacatcctcaagcatatacgaccaatgagtaccgaaactactgccaaata 587
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12743 aagattactcaacatcctcaagcatatacgaccaatgagtaccgaaactactgccaaata 12802

                                                                         
Query: 588   ttattcaaaaattgttgagtctgcgcaagcggaccagagcttaaagctaaaccacacatg 647
             |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12803 ttatccaaaaattgttgagtctgcgcaagcggaccagagcttaaagctaaaccacacatg 12862

                                                                         
Query: 648   tttcaaggtaaaggatccaaaggtcactgntgcgttctaccaggaacaatttggtatgaa 707
             ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 12863 tttcagggtaaaggatccaaaggtcactgttgcgttctaccaggaacaatttggtatgaa 12922

                                                                         
Query: 708   gctattaaatcacaggaaatt-cctgacatgaagttggatttatacttcttatcatcccc 766
             ||||||| |||||| |||||| |||||||||||||| ||||||||||||||||||| |||
Sbjct: 12923 gctattagatcacaagaaattccctgacatgaagtttgatttatacttcttatcattccc 12982

                                                        
Query: 767   taataagcagttttcgaaacaactctcaaggggcctttgacgt 809
             |||||||||||||||| |||||||||||||| ||| |||||||
Sbjct: 12983 taataagcagttttcg-aacaactctcaaggtgccattgacgt 13024


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6402
Number of Sequences: 1807
Number of extensions: 6402
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 904
length of database: 10,358,551
effective HSP length: 16
effective length of query: 888
effective length of database: 10,329,639
effective search space: 9172719432
effective search space used: 9172719432
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)