BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC34ZD01RM1.SCF screened BAC_end (873 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig776 1340 0.0 >3x_Contig776 Length = 3521 Score = 1340 bits (676), Expect = 0.0 Identities = 744/760 (97%), Gaps = 5/760 (0%) Strand = Plus / Minus Query: 49 cgcaaaagactgttggccactcccgacaaatctgctacgttacaagatctagttactaat 108 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2586 cgcaaaagactgttggccactcccgacaaatctgctacgttacaagatctagttactaat 2527 Query: 109 gaaagagcagagggtaagaaaacagccagtgaaggtttattatggttaaccagaggcttg 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2526 gaaagagcagagggtaagaaaacagccagtgaaggtttattatggttaaccagaggcttg 2467 Query: 169 cagttcacggcccaggccatgaaagaaacgattgagaaccccactacggaaatgactgat 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2466 cagttcacggcccaggccatgaaagaaacgattgagaaccccactacggaaatgactgat 2407 Query: 229 acctttattgctgcttataaaaaaactttaagtcaatatcacggtatgctagtgaaacct 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2406 acctttattgctgcttataaaaaaactttaagtcaatatcacggtatgctagtgaaacct 2347 Query: 289 atattcaaattggccatgaaggcatgtccatacagaaaagatttctttgccaagcttggt 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2346 atattcaaattggccatgaaggcatgtccatacagaaaagatttctttgccaagcttggt 2287 Query: 349 gctgatcaagagaaagtcaatactcagcttaaggcctggttggctgctttggaaaatatt 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2286 gctgatcaagagaaagtcaatactcagcttaaggcctggttggctgctttggaaaatatt 2227 Query: 409 gtttctattttgttagaattcttagccaaaacatgcaaggatttgtgaagcagcaatcat 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2226 gtttctattttgttagaattcttagccaaaacatgcaaggatttgtgaagcagcaatcat 2167 Query: 469 ttccttagcattgcgctcaagataaaatgatccatacccatagtacatttaaaagtctaa 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2166 ttccttagcattgcgctcaagataaaatgatccatacccatagtacatttaaaagtctaa 2107 Query: 529 tattattatatataaagtagataatatttaaaggacactttacagatccacttaatggaa 588 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 2106 tattattatatataaagtagataatattaaaaggacactttacagatccacttaatggaa 2047 Query: 589 agggttccatagcatatgtaaccgagaattacttccttgca-gcatttc-aaagatggat 646 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||| Sbjct: 2046 agggttccatagcatatgtaaccgagaattacttc-ttgcaagcatttcaaaagatggat 1988 Query: 647 actagctattggagggtatgacaggtagatgaaatagtgtatctgttattaaaacttgaa 706 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1987 actagctattggaggttatgacaggtagatgaaatagtgtatctgttattaaaacttgaa 1928 Query: 707 acttgaccttatgatccgtttcctgtactttcgatggatgggccttaagnaaggatttat 766 |||||||||||||||||||||||||||||| |||||||||| | | ||| ||||||| || Sbjct: 1927 acttgaccttatgatccgtttcctgtacttccgatggatggacataaag-aaggattaat 1869 Query: 767 tgaaaacagttttccaccaaaggaaattgaacaaaaaaat 806 ||||||||| | |||| ||| |||||||||||||||||| Sbjct: 1868 agaaaacagtataccacgaaa-gaaattgaacaaaaaaat 1830 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7285 Number of Sequences: 1807 Number of extensions: 7285 Number of successful extensions: 60 Number of sequences better than 1.0e-20: 1 length of query: 873 length of database: 10,358,551 effective HSP length: 16 effective length of query: 857 effective length of database: 10,329,639 effective search space: 8852500623 effective search space used: 8852500623 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)