BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC34ZD06FM1.SCF screened BAC_end (933 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig521 1312 0.0 >3x_Contig521 Length = 2327 Score = 1312 bits (662), Expect = 0.0 Identities = 671/674 (99%) Strand = Plus / Minus Query: 86 ctaactggagattggtcgaagttggccgtgttgttttggttaaacaaggccaatccgccg 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 674 ctaactggagattggtcgaagttggccgtgttgttttggttaaacaaggccaatccgccg 615 Query: 146 gcaagttggccactattgttgaaatcattgaccaaaagagagtatgttttacagattata 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 614 gcaagttggccactattgttgaaatcattgaccaaaagagagtatgttttacagattata 555 Query: 206 atgaaacggagattccctgtacagtaccatctttccatttgaaataagaacagatatcga 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 554 atgaaacggagattccctgtacagtaccatctttccatttgaaataagaacagatatcga 495 Query: 266 tcacactgcgatctggtattcttatgctttatttgggaaagttgcatagatgtataggat 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 494 tcacactgcgatctggtattcttatgctttatttgggaaagttgcatagatgtataggat 435 Query: 326 cgaaccgaagaataatatgaggaagaggaaagaatgattcatgataaactgtttcccgag 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 434 cgaaccgaagaataatatgaggaagaggaaagaatgattcatgataaactgtttcccgag 375 Query: 386 ttaaagaaagtatactttgagaaatgaatgaaaaactattgtactgaacagacatcgaga 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 374 ttaaagaaagtatactttgagaaatgaatgaaaaactattgtactgaacagacatcgaga 315 Query: 446 gagaggtttagactacgtttgttttccctccttctggtaaggttaggaatgtgtcgttaa 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 314 gagaggtttagactacgtttgttttccctccttctggtaaggttaggaatgtgtcgttaa 255 Query: 506 tactcgatggctctcgtacttggtatgaacatgacagtccttttcctagttatttttttg 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 254 tactcgatggctctcgtacttggtatgaacatgacagtccttttcctagttatttttttg 195 Query: 566 tttctatccataaactcgtatcgaacaatttttactaacaaaatatccatgacattaact 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 194 tttctatccataaactcgtatcgaacaatttttactaacaaaatatccatgacattaact 135 Query: 626 tgtctaattttaatttccttccaggctttgattgatggtccaaccactggtgtcccaaga 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134 tgtctaattttaatttccttccaggctttgattgatggtccaaccactggtgtcccaaga 75 Query: 686 caagctatcaactttagtcaagtcgttttgactccattgacctttgctgttccaagaagt 745 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || Sbjct: 74 caagctatcaacttaggtcaagtcgttttgactccattgacctttgctgttccaagaggt 15 Query: 746 gctaagtctgctac 759 |||||||||||||| Sbjct: 14 gctaagtctgctac 1 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7634 Number of Sequences: 1807 Number of extensions: 7634 Number of successful extensions: 53 Number of sequences better than 1.0e-20: 1 length of query: 933 length of database: 10,358,551 effective HSP length: 16 effective length of query: 917 effective length of database: 10,329,639 effective search space: 9472278963 effective search space used: 9472278963 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)