BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC34ZD07RM1.SCF screened BAC_end (864 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1085 1138 0.0 >3x_Contig1085 Length = 5008 Score = 1138 bits (574), Expect = 0.0 Identities = 583/586 (99%) Strand = Plus / Minus Query: 48 ttgcaatcacgaccttaaatattttctgtacgttgattgatgattgggtcgagcaaaata 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 588 ttgcaatcacgaccttaaatattttctgtacgttgattgatgattgggtcgagcaaaata 529 Query: 108 tcagaggcgatttcataacttgagcgtatttcatcgcagttctagatacattttcttgat 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 528 tcagaggcgatttcataacttgagcgtatttcatcgcagttctagatacattttcttgat 469 Query: 168 attcggggtccatatcgacgaaaaggtcatatttagttccaaccagaattgaaattgctg 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 468 attcggggtccatatcgacgaaaaggtcatatttagttccaaccagaattgaaattgctg 409 Query: 228 tatcattgaacccccttgcttgtctgtaccattcttttatcgaatttaaagtctctggcc 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 408 tatcattgaacccccttgcttgtctgtaccattcttttatcgaatttaaagtctctggcc 349 Query: 288 gcgtcaaatcgaaaagaaatactattgcaactgcaccttcggatactaaagggagcatat 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 348 gcgtcaaatcgaaaagaaatactattgcaactgcaccttcggatactaaagggagcatat 289 Query: 348 tgataaattcacgttgacctccaagatccattatggagaatataacgtctgtggatccca 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 288 tgataaattcacgttgacctccaagatccattatggagaatataacgtctgtggatccca 229 Query: 408 gcaccactttccgctcgaggtaatgcacccccaatgtctgcgtatattcctcatcaaaca 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 228 gcaccactttccgctcgaggtaatgcacccccaatgtctgcgtatattcctcatcaaaca 169 Query: 468 cattttgtacgtatttgaccattaaagaagtctttccaacttgtgcatcacctatcaggc 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 168 cattttgtacgtatttgaccattaaagaagtctttccaacttgtgcatcacctatcaggc 109 Query: 528 caactttcaccttgacctggtgtctaaagctcggtactcgatctttattcagagacattg 587 ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 108 caactttcaccttgacctggtgtctaaggctcggtactcgatctttatccagagacattg 49 Query: 588 caacgaaaaaaaaaagagtgttatctgtagacttggctcactgctc 633 ||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 48 caacgaaaaaaaaaagagtgttatctgtagacttgtctcactgctc 3 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6899 Number of Sequences: 1807 Number of extensions: 6899 Number of successful extensions: 47 Number of sequences better than 1.0e-20: 1 length of query: 864 length of database: 10,358,551 effective HSP length: 16 effective length of query: 848 effective length of database: 10,329,639 effective search space: 8759533872 effective search space used: 8759533872 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)