BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC34ZD08RM1.SCF screened BAC_end (895 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1710 1092 0.0 >3x_Contig1710 Length = 16151 Score = 1092 bits (551), Expect = 0.0 Identities = 628/643 (97%), Gaps = 8/643 (1%) Strand = Plus / Minus Query: 46 catgtcgtctcaagtgccttatcattttgaaacaaccaagtaggtatgaatatgaaataa 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1007 catgtcgtctcaagtgccttatcattttgaaacaaccaagtaggtatgaatatgaaataa 948 Query: 106 attattaggaaaccagtacccaattgatgtcccacatcgatataatcgatacataatctt 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 947 attattaggaaaccagtacccaattgatgtcccacatcgatataatcgatacataatctt 888 Query: 166 atatccgtctgatcttcatcctggatcggttataccaagcacgaattcattacgtcagca 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 887 atatccgtctgatcttcatcctggatcggttataccaagcacgaattcattacgtcagca 828 Query: 226 tacatgctccagtaccacattgtattggcacagacgcaaattacttattctttgcaaaaa 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 827 tacatgctccagtaccacattgtattggcacagacgcaaattacttattctttgcaaaaa 768 Query: 286 cgatataaaagcgatgcatgattccgaggagatacacagtacgaaataaacccagggtat 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 767 cgatataaaagcgatgcatgattccgaggagatacacagtacgaaataaacccagggtat 708 Query: 346 taaattcgatattcgcttttgacacgtcgcattccttccaatgtggcactctaacatgtc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 707 taaattcgatattcgcttttgacacgtcgcattccttccaatgtggcactctaacatgtc 648 Query: 406 ttaatcctcctctttcttctgggatcttactgccgttctctttttttttttttttttttt 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 647 ttaatcctcctctttcttctgggatcttactgccgttctctttttttttttttttttttt 588 Query: 466 gcctgtttggaaaag-aaaagtgaaagctagaatttgattgtcatcttt-gaaattgccg 523 ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 587 gcctgtttggaaaagaaaaagtgaaagctagaatttgattgtcatctttggaaattgccg 528 Query: 524 tttgaaat-gaacaatggataagcgtacggggcgtctc-agggcacagtgcctcgcagag 581 |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 527 tttgaaatggaacaatggataagcgtacggggcgtctcaagggcacagtgcctcgcagag 468 Query: 582 gcg-cagtatttcatacgataagtaggcaatgttttctggattatttttagaacatcggg 640 ||| ||||||| ||||||||| ||| ||||||||||||| |||| |||||| |||||| | Sbjct: 467 gcgccagtattccatacgataggta-gcaatgttttctgtatta-ttttagtacatcgtg 410 Query: 641 catactgattatacaatgcctggctttttttttcttacttttg 683 ||||||||| ||||||||| | ||||||||||||||||||||| Sbjct: 409 catactgataatacaatgcat-gctttttttttcttacttttg 368 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 22,228 Number of Sequences: 1807 Number of extensions: 22228 Number of successful extensions: 4070 Number of sequences better than 1.0e-20: 1 length of query: 895 length of database: 10,358,551 effective HSP length: 16 effective length of query: 879 effective length of database: 10,329,639 effective search space: 9079752681 effective search space used: 9079752681 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)