BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC34ZE05RM1.SCF screened BAC_end
         (920 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1775                                                        1546   0.0  

>3x_Contig1775 
          Length = 26320

 Score = 1546 bits (780), Expect = 0.0
 Identities = 859/880 (97%), Gaps = 4/880 (0%)
 Strand = Plus / Plus

                                                                         
Query: 33    agcttctataat-atgtgctaacgttt-ataatcgatcttgacatcatttaaataggcgt 90
             |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 24164 agcttctataatcatgtgctaacgtttcataatcgatcttgacatcatttaaataggcgt 24223

                                                                         
Query: 91    cgatctcatcggaataatccaaatgaattacgtctatagtggcttctgtctcttcgacaa 150
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24224 cgatctcatcggaataatccaaatgaattacgtctatagtggcttctgtctcttcgacaa 24283

                                                                         
Query: 151   gaacacaattctgtaactttataggtatgttcaatccgtttgattctggtttgaccgata 210
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24284 gaacacaattctgtaactttataggtatgttcaatccgtttgattctggtttgaccgata 24343

                                                                         
Query: 211   cctgtttccttataatctttccagtgggtaagaccaccaaagaggtagcatcattctccc 270
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24344 cctgtttccttataatctttccagtgggtaagaccaccaaagaggtagcatcattctccc 24403

                                                                         
Query: 271   aaatctcagggaattggaagctatccaaatggttttgtaaatagttcctaaaaccaatgt 330
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24404 aaatctcagggaattggaagctatccaaatggttttgtaaatagttcctaaaaccaatgt 24463

                                                                         
Query: 331   tctttctttctaccaatttaatgacatggaaaatgatctcgaactgttttaatatgttga 390
             |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 24464 tctttctttctaccaatttaatgacatggaaaatgatctcgaactgttgtaatatgttga 24523

                                                                         
Query: 391   gatccgcgaatttgctattgatatcctctgtgtaccaaagtagagatttgtttaatttcg 450
             ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 24524 gatccgcgaatctgctattgatatcctctgtgtaccaaagtagagatttgtttaattccg 24583

                                                                         
Query: 451   aattaaaaatgtggtacttcactatttcatcccaatgtttcaaggataccgtcttatcct 510
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24584 aattaaaaatgtggtacttcactatttcatcccaatgtttcaaggataccgtcttatcct 24643

                                                                         
Query: 511   gttctaaagacctgatcaacctcaacaagatactcttgaataaattcagtatatgaccct 570
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24644 gttctaaagacctgatcaacctcaacaagatactcttgaataaattcagtatatgaccct 24703

                                                                         
Query: 571   cttcgtcctgatccgtgctgcccccatttggatcctccgattgaaccaaatccaacgaat 630
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 24704 cttcgtcctgatccgtgctgcccccatttggatcctccgattgaaccaaatccaacgaat 24763

                                                                         
Query: 631   cattttcgagactccatcccgcattattatctaagagcattattctttcatcatacgtga 690
             ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 24764 cattttcgagactccatcccgcattataatctaagagcattattctttcatcaaacgtga 24823

                                                                         
Query: 691   tttcagtccaccaaggtttccccgtagtgaaacctatcgttcagtaaccagtacaaacgt 750
             |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 24824 tttcagtccaccaaggtttccccgtagtgaaacctagcgtccagtaaccagtacaaacgt 24883

                                                                         
Query: 751   tatggaaccacatcacactgtactgataataccaggactgaatcaattcctgcaacggta 810
             |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 24884 tatggaaccacatcacactgtactgataataccaggactggatcaattcctgcaacggta 24943

                                                                         
Query: 811   cataatccaacgcgattgggggggcacttatttaactggttcaagattgttcgttcgata 870
             || |||||||||||||| |||||  |||||||||||||||||||||||||||| ||||||
Sbjct: 24944 caaaatccaacgcgatt-gggggcaacttatttaactggttcaagattgttcggtcgata 25002

                                                     
Query: 871   ta-ttattccctttcacagccgttgtttctaaatctgatt 909
             || | || || ||||||||||||||||||  |||||||||
Sbjct: 25003 tagtcatcccatttcacagccgttgtttcgtaatctgatt 25042


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6727
Number of Sequences: 1807
Number of extensions: 6727
Number of successful extensions: 65
Number of sequences better than 1.0e-20: 1
length of query: 920
length of database: 10,358,551
effective HSP length: 16
effective length of query: 904
effective length of database: 10,329,639
effective search space: 9337993656
effective search space used: 9337993656
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)