BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC34ZE05RM1.SCF screened BAC_end (920 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1775 1546 0.0 >3x_Contig1775 Length = 26320 Score = 1546 bits (780), Expect = 0.0 Identities = 859/880 (97%), Gaps = 4/880 (0%) Strand = Plus / Plus Query: 33 agcttctataat-atgtgctaacgttt-ataatcgatcttgacatcatttaaataggcgt 90 |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 24164 agcttctataatcatgtgctaacgtttcataatcgatcttgacatcatttaaataggcgt 24223 Query: 91 cgatctcatcggaataatccaaatgaattacgtctatagtggcttctgtctcttcgacaa 150 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24224 cgatctcatcggaataatccaaatgaattacgtctatagtggcttctgtctcttcgacaa 24283 Query: 151 gaacacaattctgtaactttataggtatgttcaatccgtttgattctggtttgaccgata 210 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24284 gaacacaattctgtaactttataggtatgttcaatccgtttgattctggtttgaccgata 24343 Query: 211 cctgtttccttataatctttccagtgggtaagaccaccaaagaggtagcatcattctccc 270 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24344 cctgtttccttataatctttccagtgggtaagaccaccaaagaggtagcatcattctccc 24403 Query: 271 aaatctcagggaattggaagctatccaaatggttttgtaaatagttcctaaaaccaatgt 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24404 aaatctcagggaattggaagctatccaaatggttttgtaaatagttcctaaaaccaatgt 24463 Query: 331 tctttctttctaccaatttaatgacatggaaaatgatctcgaactgttttaatatgttga 390 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 24464 tctttctttctaccaatttaatgacatggaaaatgatctcgaactgttgtaatatgttga 24523 Query: 391 gatccgcgaatttgctattgatatcctctgtgtaccaaagtagagatttgtttaatttcg 450 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 24524 gatccgcgaatctgctattgatatcctctgtgtaccaaagtagagatttgtttaattccg 24583 Query: 451 aattaaaaatgtggtacttcactatttcatcccaatgtttcaaggataccgtcttatcct 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24584 aattaaaaatgtggtacttcactatttcatcccaatgtttcaaggataccgtcttatcct 24643 Query: 511 gttctaaagacctgatcaacctcaacaagatactcttgaataaattcagtatatgaccct 570 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24644 gttctaaagacctgatcaacctcaacaagatactcttgaataaattcagtatatgaccct 24703 Query: 571 cttcgtcctgatccgtgctgcccccatttggatcctccgattgaaccaaatccaacgaat 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24704 cttcgtcctgatccgtgctgcccccatttggatcctccgattgaaccaaatccaacgaat 24763 Query: 631 cattttcgagactccatcccgcattattatctaagagcattattctttcatcatacgtga 690 ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| Sbjct: 24764 cattttcgagactccatcccgcattataatctaagagcattattctttcatcaaacgtga 24823 Query: 691 tttcagtccaccaaggtttccccgtagtgaaacctatcgttcagtaaccagtacaaacgt 750 |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| Sbjct: 24824 tttcagtccaccaaggtttccccgtagtgaaacctagcgtccagtaaccagtacaaacgt 24883 Query: 751 tatggaaccacatcacactgtactgataataccaggactgaatcaattcctgcaacggta 810 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 24884 tatggaaccacatcacactgtactgataataccaggactggatcaattcctgcaacggta 24943 Query: 811 cataatccaacgcgattgggggggcacttatttaactggttcaagattgttcgttcgata 870 || |||||||||||||| ||||| |||||||||||||||||||||||||||| |||||| Sbjct: 24944 caaaatccaacgcgatt-gggggcaacttatttaactggttcaagattgttcggtcgata 25002 Query: 871 ta-ttattccctttcacagccgttgtttctaaatctgatt 909 || | || || |||||||||||||||||| ||||||||| Sbjct: 25003 tagtcatcccatttcacagccgttgtttcgtaatctgatt 25042 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6727 Number of Sequences: 1807 Number of extensions: 6727 Number of successful extensions: 65 Number of sequences better than 1.0e-20: 1 length of query: 920 length of database: 10,358,551 effective HSP length: 16 effective length of query: 904 effective length of database: 10,329,639 effective search space: 9337993656 effective search space used: 9337993656 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)