BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC34ZE06FM1.SCF screened BAC_end (963 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1369 1273 0.0 >3x_Contig1369 Length = 7461 Score = 1273 bits (642), Expect = 0.0 Identities = 722/741 (97%), Gaps = 6/741 (0%) Strand = Plus / Minus Query: 86 cttgatactttctaagaatcttgtctttaacaacggattcgtagtcctactggctttatt 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2008 cttgatactttctaagaatcttgtctttaacaacggattcgtagtcctactggctttatt 1949 Query: 146 ccggtttaattctaacgtactttctagttccctcaattcatcaagtaataattctctgtg 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1948 ccggtttaattctaacgtactttctagttccctcaattcatcaagtaataattctctgtg 1889 Query: 206 ttgctcttcttcgttagcaccatcgttgtctgagacacgtgacttatttgttcctgttgt 265 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1888 ttgctcttcttcgttagcaccatcgttgtctgagacacgtgacttagttgttcctgttgt 1829 Query: 266 aactgatccggataatccatcagcaccgttctcttcatcctcctcttcttcatcctcttc 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1828 aactgatccggataatccatcagcaccgttctcttcatcctcctcttcttcatcctcttc 1769 Query: 326 ttcctcctcttcttcctcttcgtcctcctcctcttcgtcttcatcatcaccgttatcttg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1768 ttcctcctcttcttcctcttcgtcctcctcctcttcgtcttcatcatcaccgttatcttg 1709 Query: 386 ttcaacgtcatcaccggtctcctcaagaagttgtcctggtcttacaacactgccagtatc 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1708 ttcaacgtcatcaccggtctcctcaagaagttgtcctggtcttacaacactgccagtatc 1649 Query: 446 tgtagacatcgctgctccagccggtccattaaccatgcttgccggtatagaaccatcagt 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1648 tgtagacatcgctgctccagccggtccattaaccatgcttgccggtatagaaccatcagt 1589 Query: 506 agtttctgtttgtagagcttgttccaattccaattcaagatcttcttcatgatcctcttc 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1588 agtttctgtttgtagagcttgttccaattccaattcaagatcttcttcatgatcctcttc 1529 Query: 566 ctcatcttcttccgcggcacctgtaacatgatgtggnttgatctcttggctgtagccaac 625 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1528 ctcatcttcttccgcggcacctgtaacatgatgtggtttgatctcttggctgtagccaac 1469 Query: 626 agaagatgtttcattcatatgctcaccagccttttgattatgtgcaagatctgctgcact 685 |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1468 agaagatgtttcatccatatgctcaccagccttttgataatgtgcaagatctgctgcact 1409 Query: 686 tgtagacccttgctgttgaattgcattctcattaactaactcgtacccgaactttttcag 745 |||||||| ||||||||||||||||| ||||||||||| ||||||||||||| | ||||| Sbjct: 1408 tgtagacctttgctgttgaattgcatcctcattaactagctcgtacccgaac-tcttcag 1350 Query: 746 ctttagcattttaatttaaataaatttttcaacagtacgttccacaatattcaaaagcag 805 ||| |||| | |||||| ||| ||||||||||||||||||||||| ||| ||||| |||| Sbjct: 1349 cttcagca-tctaatttcaat-aatttttcaacagtacgttccac-ataatcaaaggcag 1293 Query: 806 ttgggtcccattcctatgtct 826 || ||||||| |||||||||| Sbjct: 1292 tt-ggtccca-tcctatgtct 1274 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8589 Number of Sequences: 1807 Number of extensions: 8589 Number of successful extensions: 326 Number of sequences better than 1.0e-20: 1 length of query: 963 length of database: 10,358,551 effective HSP length: 16 effective length of query: 947 effective length of database: 10,329,639 effective search space: 9782168133 effective search space used: 9782168133 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)