BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC34ZE11FM1.SCF screened BAC_end (946 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1775 1271 0.0 >3x_Contig1775 Length = 26320 Score = 1271 bits (641), Expect = 0.0 Identities = 712/729 (97%), Gaps = 5/729 (0%) Strand = Plus / Plus Query: 86 ctttcttgttattagtgctaatttgatttgatgtggtgatatcctgttggatggatctgc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21432 ctttcttgttattagtgctaatttgatttgatgtggtgatatcctgttggatggatctgc 21491 Query: 146 tggaatgttcaactgagaaatttcttggattgaaagccgttgtagaatggactcatctaa 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21492 tggaatgttcaactgagaaatttcttggattgaaagccgttgtagaatggactcatctaa 21551 Query: 206 gttgaggtcaggcaataaatttttctgtttcatactagtttctaatgcatacagtcgtaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21552 gttgaggtcaggcaataaatttttctgtttcatactagtttctaatgcatacagtcgtaa 21611 Query: 266 aaaggatggatttagcgtctgttggcgagttctcttttgcgttatgggatccaatgtgat 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21612 aaaggatggatttagcgtctgttggcgagttctcttttgcgttatgggatccaatgtgat 21671 Query: 326 ggattccatgctattagtttgtagatgctgttgctgtgaagagttgggccagtgctccat 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21672 ggattccatgctattagtttgtagatgctgttgctgtgaagagttgggccagtgctccat 21731 Query: 386 ctctacaacttgttcttgtaaaaagatcggtttgaatttcctgtgacgtttatgctcttg 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21732 ctctacaacttgttcttgtaaaaagatcggtttgaatttcctgtgacgtttatgctcttg 21791 Query: 446 ttctgagctttcatctgatgtattggtaaatattggatcgatatccatgcgtttgttttt 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21792 ttctgagctttcatctgatgtattggtaaatattggatcgatatccatgcgtttgttttt 21851 Query: 506 gggtctttcgtagattggtgtaattggttgtagaatgtccttctctg-aaaagattctgt 564 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 21852 gggtctttcgtagattggtgtaattggttgtagaatgtccttctctgaaaaagattctgt 21911 Query: 565 gaaatccaaatcgttcaaaatatacatctttatatgaaggcaaacttcatatccagtgct 624 ||||||||||||||||||| |||||||||| ||||| | ||||||||||||||||||| Sbjct: 21912 gaaatccaaatcgttcaaattatacatcttagtatgaggcaaaacttcatatccagtgct 21971 Query: 625 ctgaaggtcacttatcttctgcacgcgtcgttgcgatgtttccgtatcgctgtcgacatg 684 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21972 ctgagggtcacttatcttctgcacgcgtcgttgcgatgtttccgtatcgctgtcgacatg 22031 Query: 685 gctcaatggatggttcccggtcagttactccatatagtggttttgtcatctttagaacct 744 ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 22032 gctcaatggatggtt-ccggtcagttactccatatagt-gttttgtcatctttagaacct 22089 Query: 745 acatttgaaaacactttatttgcacttgttaccatagggactcgaaatttgatgataatt 804 |||| ||||||||| |||| |||||| | ||||||||||||||| |||||||||||||| Sbjct: 22090 acatctgaaaacacattatctgcactcg-taccatagggactcg-aatttgatgataata 22147 Query: 805 tgctccgta 813 ||||||||| Sbjct: 22148 tgctccgta 22156 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7637 Number of Sequences: 1807 Number of extensions: 7637 Number of successful extensions: 51 Number of sequences better than 1.0e-20: 1 length of query: 946 length of database: 10,358,551 effective HSP length: 16 effective length of query: 930 effective length of database: 10,329,639 effective search space: 9606564270 effective search space used: 9606564270 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)