BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC34ZE12RM1.SCF screened BAC_end (930 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1612 1318 0.0 >3x_Contig1612 Length = 15608 Score = 1318 bits (665), Expect = 0.0 Identities = 698/708 (98%), Gaps = 1/708 (0%) Strand = Plus / Minus Query: 41 ctttgtcgtgatcaccatggaacaaagttaagaaagaagcttgggtaccggtggtaccct 100 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13716 ctttgtcgtgatcaccatggaacaaagttaagaaagaagcttgggtaccggtggtaccct 13657 Query: 101 tgacaccacgtagaccgatatcgtttctagctctgacaaagtttcttatatcccacaata 160 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 13656 tgacaccacgtagaccgatatcgtttctagctctgacaaagtttcttagatcccacaata 13597 Query: 161 gttcttggatccacaatgtgactcttttacccaaggtagtcaattgagctggttggaaat 220 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13596 gttcttggatccacaatgtgactcttttacccaaggtagtcaattgagctggttggaaat 13537 Query: 221 gagtccagcccaatactggtagatccttgtactccaaagcaaacttggacaatctgttga 280 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13536 gagtccagcccaatactggtagatccttgtactccaaagcaaacttggacaatctgttga 13477 Query: 281 taacattgaccaacttatgaatcaagatatcgtaagcatctctcaagaagatcaagtcag 340 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 13476 taacattgaccaacttaggaatcaagatatcgtaagcatctctcaagaagatcaagtcag 13417 Query: 341 cattatcggtgacaaaacatgatgtagcacctatatggatgataccagcggctttaggac 400 |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| Sbjct: 13416 cattatcggtgacaaaacatgaggtagcacctagatggatgataccagcggctttaggac 13357 Query: 401 aagtttcaccaaaagtgtgaacgtgagccataacatcgtgtctgacaatggcctcttgct 460 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13356 aagtttcaccaaaagtgtgaacgtgagccataacatcgtgtctgacaatggcctcttgct 13297 Query: 461 tggaagcagcagcgatttcttcatcgttgatggtcaaatgagccttcatttgctcaatgg 520 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13296 tggaagcagcagcgatttcttcatcgttgatggtcaaatgagccttcatttgctcaatgg 13237 Query: 521 cttcttcactaatgacatcaagacctaattccttttcagcaatagccaaattcaaccaaa 580 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13236 cttcttcactaatgacatcaagacctaattccttttcagcaatagccaaattcaaccaaa 13177 Query: 581 gctttctccaggtagagaatctgtttctcaaagagaatatggaagacatctcctcagatg 640 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 13176 gctttctccaggtagagaatctgtttctcaaagagaatatggaagacatctcctcagaag 13117 Query: 641 cataacgagaagatagtgttgtggtgtacttatcgntatcagacatcgctaatgatattt 700 |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| Sbjct: 13116 cataacgagaagatagtggtgtggtgtacttatcgtaatcagacatcgctaatgatattt 13057 Query: 701 cttattatattaccctcaattttttttt-aaaccagatttgatacctt 747 |||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 13056 cttattatattaccctcaatttttttttaaaaccagaattgatacctt 13009 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 14,643 Number of Sequences: 1807 Number of extensions: 14643 Number of successful extensions: 85 Number of sequences better than 1.0e-20: 1 length of query: 930 length of database: 10,358,551 effective HSP length: 16 effective length of query: 914 effective length of database: 10,329,639 effective search space: 9441290046 effective search space used: 9441290046 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)