BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC34ZF09RM1.SCF screened BAC_end (935 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig897 1364 0.0 >3x_Contig897 Length = 3942 Score = 1364 bits (688), Expect = 0.0 Identities = 788/814 (96%), Gaps = 6/814 (0%) Strand = Plus / Minus Query: 42 cttttctctctgtgtattcgcactctcctcctgttagctaagagaatataaaaggtgatt 101 ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3884 cttttctctctttttattcgcactctcctcctgttagctaagagaatataaaaggtgatt 3825 Query: 102 tgctatttgatcttaccaaatacatacttaacttatatatacatatatataggcacgtta 161 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3824 tgctatttgatcttaccaaatacatacttaacttatatatacatatatataggcacgtta 3765 Query: 162 ttatccaagtgaagtaaaattagaatttatgaaatataatacattaatgacaccacatgc 221 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3764 ttatccaagtgaagtaaaattagaatttatgaaatataatacattaatgacaccacatgc 3705 Query: 222 cagcggaaatcacctcctctatctctgataaggaaatctgcttgaggaacaaggtgagat 281 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3704 cagcggaaatcacctcctctatctctgataaggaaatctgcttgaggaacaaggtgagat 3645 Query: 282 ttcctttcgcaaaaagataggcatgctgtctccacggcactgtggaaatttccattacaa 341 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3644 ttcctttcgcaaaaagataggcatgctgtctccacggcactgtggaaatttccattacaa 3585 Query: 342 aaatgaacggataaccaaaattgaatcatctttaggctgaaccctttcagcccattaatt 401 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3584 aaatgaacggataaccaaaattgaatcatctttaggctgaaccctttcagcccattaatt 3525 Query: 402 ctgattgcacgtgcttcggcaaatgtcaatggtcatataggaattttattaatttggtgt 461 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3524 ctgattgcacgtgcttcggcaaatgtcaatggtcatataggaattttattaatttggtgt 3465 Query: 462 aattaatatcaatcctgcgctgcaacgatttctggcattcctcacagccgcatgttgagg 521 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3464 aattaatatcaatcctgcgctgcaacgatttctggcattcctcacagccgcatgttgagg 3405 Query: 522 cagcacgcacgggttctctcaattttttattatttttttaaattggatttggccacgatg 581 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 3404 cagcacgcacgggttctctcaattttttattatttttttaaattggatttggccacgagg 3345 Query: 582 gcatggtcagtagccatgctcggggtaatcttaaatttgacatttattccagaaggaaaa 641 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3344 gcatggtcagtagccatgctcggggtaatcttaaatttgacatttattccagaaggaaaa 3285 Query: 642 aaaaacataatgcacatctgtcgcatattcgggtaatggtaaagatgcttaacgaaattt 701 ||||||| || |||||||||||||| || |||||||||||||||| |||||||||||||| Sbjct: 3284 aaaaacaaaaggcacatctgtcgcaaatccgggtaatggtaaagaggcttaacgaaattt 3225 Query: 702 ttccgtgatatacacaaagatacctattaaaatggcattttactggaaacaatag-aaag 760 |||||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||| Sbjct: 3224 ttccgtgatatacacaaagatacctattaaaagggcattttactggaacaaatagaaaag 3165 Query: 761 ctgat-aacatgncagaaagg-agcaatcctcctggttg-aatcangtcttacaaccgga 817 ||||| |||||| ||||||| ||||||||||||||||| ||||| |||||| |||||| Sbjct: 3164 ctgataaacatgcaagaaaggaagcaatcctcctggttgaaatcaggtcttaacaccgga 3105 Query: 818 -cacaatttccg-tatattacgaattttcatttt 849 ||||||| ||| ||||| || ||||||||||| Sbjct: 3104 gcacaattcccgatatataccgtattttcatttt 3071 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8363 Number of Sequences: 1807 Number of extensions: 8363 Number of successful extensions: 148 Number of sequences better than 1.0e-20: 1 length of query: 935 length of database: 10,358,551 effective HSP length: 16 effective length of query: 919 effective length of database: 10,329,639 effective search space: 9492938241 effective search space used: 9492938241 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)