BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC34ZF11FM1.SCF screened BAC_end (910 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig511 1415 0.0 >3x_Contig511 Length = 2409 Score = 1415 bits (714), Expect = 0.0 Identities = 804/822 (97%), Gaps = 11/822 (1%) Strand = Plus / Plus Query: 86 accatttgctcctt-aacaacttttcgtcccactgaatatctttggctgcgttttctctt 144 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 505 accatttgctccttcaacaacttttcgtcccactgaatatctttggctgcgttttctctt 564 Query: 145 aacctcagcagcctttccttgtactcttcctgtttatccgagatttgggtgaaaatttgt 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 565 aacctcagcagcctttccttgtactcttcctgtttatccgagatttgggtgaaaatttgt 624 Query: 205 tcaatagcctcaacttcaagcttattatgatctctatattgagaaatgtatctgtaacga 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 625 tcaatagcctcaacttcaagcttattatgatctctatattgagaaatgtatctgtaacga 684 Query: 265 taaatcaaattttctaattgttctttcgtttcaggtagtggcaagattactctttccacc 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 685 taaatcaaattttctaattgttctttcgtttcaggtagtggcaagattactctttccacc 744 Query: 325 ttcttcatttcttctagaacagcggcaatctggttctgtccaatagcactaccactgtcg 384 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 745 ttcttcatttcttctagaacagcggcaatctggttctgtccaatagcactaacactgtcg 804 Query: 385 ttccgaaaattgttgttgcttcctttgtcagcaccaacatggttgtcttcgatattgccg 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 805 ttccgaaaattgttgttgcttcctttgtcagcaccaacatggttgtcttcgatattgccg 864 Query: 445 ttaacgtcctggttttcagtttcggaattcccattatcaacattctcagaattcactata 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 865 ttaacgtcctggttttcagtttcggaattcccattatcaacattctcagaattcactata 924 Query: 505 ggaagcggataaggaggcgctgtatccgcgttattcgttacgacgacttgatccattgtt 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 925 ggaagcggataaggaggcgctgtatccgcgttattcgttacgacgacttgatccattgtt 984 Query: 565 gttttatttcacacttcttaacgtgatccaggtctcttcccgctagtgagctntaaacct 624 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 985 gttttatttcacacttcttaacgtgatccaggtctcttcccgctagtgagctttaaacct 1044 Query: 625 tttttattctgaaagggggtaaaacaataactgaagtcctgctaaaaaaattcagagttg 684 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1045 tttttattctgaaagggggtaaaacaataactgaagtcctgctaaaaaaattcagagttg 1104 Query: 685 tcacaaagctaacgcgatacaaacaggtactattgccctanaattctttactgtttcgct 744 |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1105 tcacaaag-taacgcgatacaaacaggtactattgccctagaattctttactgtttcgct 1163 Query: 745 ttcggtgcgtctattttttttaccgccgttgccgtgttgaaaacaaa-ctctgttcgtcc 803 |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| Sbjct: 1164 ttcggtgcgtctatttttttagccgccgttgccgtgttgaaaacaaacctctgttcgtcc 1223 Query: 804 ttttctcgtgtc-aaact-aattcagaat-aaatc-aactgttt--caattcatcctc-t 856 |||||||||||| ||||| |||||||||| ||||| |||||||| ||||||||||| | Sbjct: 1224 ttttctcgtgtcaaaactaaattcagaataaaatcaaactgttttcaaattcatcctctt 1283 Query: 857 tttcacaa-tttatttatcgngtttacttttttctttgacat 897 |||||||| ||||||||||| ||||||||||||||||||||| Sbjct: 1284 tttcacaattttatttatcgtgtttacttttttctttgacat 1325 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7058 Number of Sequences: 1807 Number of extensions: 7058 Number of successful extensions: 52 Number of sequences better than 1.0e-20: 1 length of query: 910 length of database: 10,358,551 effective HSP length: 16 effective length of query: 894 effective length of database: 10,329,639 effective search space: 9234697266 effective search space used: 9234697266 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)