BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC34ZG01RM1.SCF screened BAC_end (909 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1640 1431 0.0 >3x_Contig1640 Length = 15521 Score = 1431 bits (722), Expect = 0.0 Identities = 836/867 (96%), Gaps = 6/867 (0%) Strand = Plus / Plus Query: 47 aacgttgagttgaatctagagaaagtagagagtattatggatactgctgcagaacagata 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5321 aacgttgagttgaatctagagaaagtagagagtattatggatactgctgcagaacagata 5380 Query: 107 gaaattcaaagagagatagacgatgctttatcaaacgcggttgtcggatctacgataaat 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5381 gaaattcaaagagagatagacgatgctttatcaaacgcggttgtcggatctacgataaat 5440 Query: 167 gatgaagttgatagagaattggaacagttagaccgtgaggttaacggtaccaaggagact 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5441 gatgaagttgatagagaattggaacagttagaccgtgaggttaacggtaccaaggagact 5500 Query: 227 gcacctggtgtgcaagatagactggatcaactcccatcaacaaaggaattgggagaactc 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5501 gcacctggtgtgcaagatagactggatcaactcccatcaacaaaggaattgggagaactc 5560 Query: 287 aaggcttcggaaccagaaaaggaaaatggagagtcccaaaaggaaactccaaaagaagaa 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5561 aaggcttcggaaccagaaaaggaaaatggagagtcccaaaaggaaactccaaaagaagaa 5620 Query: 347 ccactattagcatgaattagaaaggaaatagtatggaaaatagaatgctctaagttcgtc 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5621 ccactattagcatgaattagaaaggaaatagtatggaaaatagaatgctctaagttcgtc 5680 Query: 407 tttgtgaatacaacagtattttgcgtcttgcatttctagctggttgttgaagtttctgta 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5681 tttgtgaatacaacagtattttgcgtcttgcatttctagctggttgttgaagtttctgta 5740 Query: 467 ttatttcattcattcaattaattaataatatatacaaaccattttacatttagatttaca 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5741 ttatttcattcattcaattaattaataatatatacaaaccattttacatttagatttaca 5800 Query: 527 ggaatgggaaattatactttggcatgtaccctttaattatgcagtgcgtattatgatttc 586 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 5801 ggaatgggaaattatactttggcatgtaccctttaattaggcagtgcgtattatgatttc 5860 Query: 587 gcaataggatagagggctatgaggaaagaagatnat-acanaagattgtgtcctagaaca 645 ||||||||| |||||||||||||||||||||| || ||| ||||||||||||||||||| Sbjct: 5861 gcaataggaaagagggctatgaggaaagaagaaaataacaaaagattgtgtcctagaaca 5920 Query: 646 tgccatggtcatttagatatgaataaaggtatggagttatgattcgtagatgagtgagtg 705 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5921 tgccatggtcattagaatatgaataaaggtatggagttatgattcgtagatgagtgagtg 5980 Query: 706 gcttccttttttcaattntcgtcaagccattccaaaaatttctggagtgaaagtactgat 765 |||| |||||||||||| |||||||||||||||||||| |||||||||||| |||||| Sbjct: 5981 gctt-cttttttcaattttcgtcaagccattccaaaaa-ttctggagtgaagtaactgat 6038 Query: 766 gattaagcgagcaccagctctgaagatcccatagtgcgattcaaagggcatactttttaa 825 ||||||||||||||||||||||| || |||||||||||||||||||| |||||||| || Sbjct: 6039 gattaagcgagcaccagctctgaggaacccatagtgcgattcaaaggcaatacttttcaa 6098 Query: 826 atcaac-acaaccttctctgcagcaacttgttacatagcgt-ttcaccactgacat-gtt 882 |||||| ||| |||||||||||||| | ||| ||||||||| |||||||||||||| || Sbjct: 6099 atcaacaacacccttctctgcagcagcatgtaacatagcgtattcaccactgacatggta 6158 Query: 883 agcacacctggggaggtcgcgacagat 909 ||||||| ||||||||||||||||| Sbjct: 6159 agcacacactgggaggtcgcgacagat 6185 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7004 Number of Sequences: 1807 Number of extensions: 7004 Number of successful extensions: 57 Number of sequences better than 1.0e-20: 1 length of query: 909 length of database: 10,358,551 effective HSP length: 16 effective length of query: 893 effective length of database: 10,329,639 effective search space: 9224367627 effective search space used: 9224367627 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)