BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC34ZG04RM1.SCF screened BAC_end (965 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1222 1215 0.0 >3x_Contig1222 Length = 5224 Score = 1215 bits (613), Expect = 0.0 Identities = 669/685 (97%), Gaps = 2/685 (0%) Strand = Plus / Plus Query: 50 gctttataattgttctaaaatgtgaaccaaccttactccatgctaacagactctctagac 109 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3644 gctttataattgttctaaaatgtgaaccaaccttactccatgctaacagactctctagac 3703 Query: 110 tgtctagtccgctagttactacacgatcaataatttcgatcggaagactcattacttttg 169 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3704 tgtctagtccgctagttactacacgatcaataatttcgatcggaagactcattacttttg 3763 Query: 170 tacccttaaatcttcttctcctccttcttatcattagcaaatctgtcaaaagtgtcaact 229 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3764 tacccttaaatcttcttctcctccttcttatcattagcaaatctgtcaaaagtgtcaact 3823 Query: 230 aatgcagcttatcttgcacgttgtaaactaggtccttataattcaactgatttcaagtac 289 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3824 aatgcagcttatcttgcacgttgtaaactaggtccttataattcaactgatttcaagtac 3883 Query: 290 gctggtatatccaagatgcctttagacttcttccagtgtttgggtcagttgagcaatctg 349 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3884 gctggtatatccaagatgcctttagacttcttccagtgtttgggtcagttgagcaatctg 3943 Query: 350 ttccgtaatctgtcgctttattctttaatatgctgactcaacctcaaagaacgttcggaa 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3944 ttccgtaatctgtcgctttattctttaatatgctgactcaacctcaaagaacgttcggaa 4003 Query: 410 tacattttgacacttaaagtaccgataaaattgtggattttgttgcctataattgtaagc 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4004 tacattttgacacttaaagtaccgataaaattgtggattttgttgcctataattgtaagc 4063 Query: 470 aatgaaatatgtttgatattccacctactggaccgtaccaacctacagattgcagcagta 529 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4064 aatgaaatatgtttgatattccacctactggaccgtaccaacctacagattgcagcagta 4123 Query: 530 tctcgtccaataacaacttccctgtctcagtttggcctcttaatccttcttactgacatt 589 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4124 tctcgtccaataacaacttccctgtctcagtttggcctcttaatccttcttactgacatt 4183 Query: 590 atatctcattacccggacataacatgtcaaaatgatactcaaggcaatcacattaagttc 649 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 4184 atatctcattacccggacataacatgtcaaaatgatactcaaggcatcaacattaagttc 4243 Query: 650 atttaaacaggtcatgccaattatttgagaatggaagattaagggagaagaagaagagat 709 |||||||||| ||||| ||| ||| |||||| | ||| |||| ||||||||||||||| Sbjct: 4244 atttaaacagtacatgcaaataattgaagaatgaaggataaaggaagaagaagaagagat 4303 Query: 710 tggccggccctggaggacacctttt 734 | |||||| || ||||||||||||| Sbjct: 4304 t-gccggcact-gaggacacctttt 4326 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8187 Number of Sequences: 1807 Number of extensions: 8187 Number of successful extensions: 66 Number of sequences better than 1.0e-20: 1 length of query: 965 length of database: 10,358,551 effective HSP length: 16 effective length of query: 949 effective length of database: 10,329,639 effective search space: 9802827411 effective search space used: 9802827411 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)