BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC34ZG06RM1.SCF screened BAC_end (904 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1581 1459 0.0 >3x_Contig1581 Length = 11429 Score = 1459 bits (736), Expect = 0.0 Identities = 842/868 (97%), Gaps = 8/868 (0%) Strand = Plus / Minus Query: 45 cttcgatgtgaaaaactcgggataactacagcattattatgagaatgactatgcatcgaa 104 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 10978 cttcgatgtgaaaaactcgggaaaactacagcattattatgagaatgactatgcatcgaa 10919 Query: 105 attacttgcaaattgtggaatcaaagaatggttaaaattgaaaggttatgagtccttagc 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10918 attacttgcaaattgtggaatcaaagaatggttaaaattgaaaggttatgagtccttagc 10859 Query: 165 acaaaaatgaaatattagcacgcaattacgctatcagaaaagtttaaatagattgaaacc 224 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 10858 acaaaaatgaaatattagcacgcaattacgctatcagaaaagtttaaatagaatgaaacc 10799 Query: 225 tgtacatatgatgaatgtaataaatatgatatgctaattaatttaaagatgtataaattt 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10798 tgtacatatgatgaatgtaataaatatgatatgctaattaatttaaagatgtataaattt 10739 Query: 285 ataaaggttgtgtatctgattatgcagcgcatgaaaacgagataggaatgtatatagtag 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10738 ataaaggttgtgtatctgattatgcagcgcatgaaaacgagataggaatgtatatagtag 10679 Query: 345 ccaggttaaaattatgtattaatgatgtctcgatgttgaagggaaggcgtaagttttaaa 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10678 ccaggttaaaattatgtattaatgatgtctcgatgttgaagggaaggcgtaagttttaaa 10619 Query: 405 acaagtttgggaatagttgtggatggcattttagaatctcttcatattgaagcccactgc 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10618 acaagtttgggaatagttgtggatggcattttagaatctcttcatattgaagcccactgc 10559 Query: 465 taatgtcttggaaatcatataacatatagcagagacaaatgacgtgacaccgcaccaaat 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10558 taatgtcttggaaatcatataacatatagcagagacaaatgacgtgacaccgcaccaaat 10499 Query: 525 tacatagtggtcatagcccttgaaactcttttctggtccgatgatggcacctgtaatagg 584 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10498 tacatagtggtcatagcccttgaaactcttttctggtccgatgatggcacctgtaatagg 10439 Query: 585 aactgctactaaagtaccaaatgcgacaacaaagtacattgtagaatatcttcttccgaa 644 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10438 aactgctactaaagtaccaaatgcgacaacaaagtacattgtagaatatcttcttccgaa 10379 Query: 645 ttcttcagtctttgagatttgtccacagcagacaggtaagatactgaagatacttnncgg 704 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 10378 ttcttcagtctttgagatttgtccacagcagacaggtaagatactgaagatacttccgga 10319 Query: 705 agataatccatanatggcactgaatgcgaat-acaccgctctggtagtggc-ataggtaa 762 ||| |||||||| |||||||||||||||||| ||||||||||||||||||| | |||||| Sbjct: 10318 agaaaatccataaatggcactgaatgcgaataacaccgctctggtagtggcaaaaggtaa 10259 Query: 763 ccacatcacataagttattatgccaagaaacactagcgttatcattggcacgttaaacct 822 |||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 10258 ccacatcacaaaagttattatgccaagaaacactagcgtaatcattgcaacgttaaacct 10199 Query: 823 tccggagat-tcactgaagaattctggt-accatctncctgttatacgggcaa-gttaac 879 |||| |||| |||||||||||| ||||| ||||||| |||| ||||| ||||| |||||| Sbjct: 10198 tccgaagatatcactgaagaatcctggtaaccatctccctggtataccggcaaggttaac 10139 Query: 880 ta-catgacc-atagat-actatcagat 904 || ||||||| |||||| |||||||||| Sbjct: 10138 taccatgaccaatagataactatcagat 10111 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6239 Number of Sequences: 1807 Number of extensions: 6239 Number of successful extensions: 30 Number of sequences better than 1.0e-20: 1 length of query: 904 length of database: 10,358,551 effective HSP length: 16 effective length of query: 888 effective length of database: 10,329,639 effective search space: 9172719432 effective search space used: 9172719432 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)