BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC34ZG08FM1.SCF screened BAC_end (926 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1335 1413 0.0 >3x_Contig1335 Length = 8696 Score = 1413 bits (713), Expect = 0.0 Identities = 772/789 (97%), Gaps = 2/789 (0%) Strand = Plus / Minus Query: 85 cttgcatattaatcatattttctcacttaaaacactaagatactatgtcaattcctagta 144 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5999 cttgcatattaatcagattttctcacttaaaacactaagatactatgtcaattcctagta 5940 Query: 145 aatcctactaatttgcttctgaactttattgatctcgcgtaaacacttacctgaggacat 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5939 aatcctactaatttgcttctgaactttattgatctcgcgtaaacacttacctgaggacat 5880 Query: 205 atgcttcgatcattagacagatctctttgtattctgtacttttccaaggtttcgacacga 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5879 atgcttcgatcattagacagatctctttgtattctgtacttttccaaggtttcgacacga 5820 Query: 265 tttttttcgattctaaatagagaatttccgaaaacggtagataaacgtgactatcatgtg 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5819 tttttttcgattctaaatagagaatttccgaaaacggtagataaacgtgactatcatgtg 5760 Query: 325 gatagaaatggggaaggtgacaacacttggattcgggattcggtgaggaaccacaatata 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5759 gatagaaatggggaaggtgacaacacttggattcgggattcggtgaggaaccacaatata 5700 Query: 385 cctagaaaagtatcctagattcattgaacaacaggtagttcttaatgattaaattacggt 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5699 cctagaaaagtatcctagattcattgaacaacaggtagttcttaatgattaaattacggt 5640 Query: 445 atacattttccaatgttcacgtgactcaaaactgtcatgtgaccgacacaaagaatacac 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5639 atacattttccaatgttcacgtgactcaaaactgtcatgtgaccgacacaaagaatacac 5580 Query: 505 tacttagatttcccaattaggagaaacgtaaacattgaaatagtgatataaagtcataga 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5579 tacttagatttcccaattaggagaaacgtaaacattgaaatagtgatataaagtcataga 5520 Query: 565 aatgcaatgctacatgtgtagaaaccacattacagtgttcatcacgacaacctataaaac 624 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5519 aatgcaatgctacatgtgtagaaaccacattacagtgttcatcacgacaacctataaaac 5460 Query: 625 tgctattcaggagccaggtactaaataagatcaaacagatacaagcctagttcaaagtag 684 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5459 tgctattcaggagccaggtactaaataagatcaaacagatacaagcctagttcaaagtag 5400 Query: 685 ctcatagaataatgactgccggccaatttcaaccattacatcagatacaggattctcaaa 744 |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 5399 ctcaaagaataatgactgccggccaatttcaaccattacatcagaaacaggattctcaaa 5340 Query: 745 ctgcgagtacatgtttgcacaaggccatgtttaa-tatccatcaccacaccagcttttag 803 ||||||||||| |||||||||||||||||||||| | ||||||||||||||||||| || Sbjct: 5339 ctgcgagtacaagtttgcacaaggccatgtttaagaaaccatcaccacaccagctttcag 5280 Query: 804 gaatgaagaacaagtttgcctcttctaaccgtgatttgctctcttccatgttcccggaat 863 |||||||||||||||||| ||| ||| | |||||||||||| ||||||||||| ||| Sbjct: 5279 aaatgaagaacaagtttgcttctcctaccgatgatttgctctc-tccatgttcccagaag 5221 Query: 864 ttgaacgat 872 ||||||||| Sbjct: 5220 ttgaacgat 5212 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5980 Number of Sequences: 1807 Number of extensions: 5980 Number of successful extensions: 46 Number of sequences better than 1.0e-20: 1 length of query: 926 length of database: 10,358,551 effective HSP length: 16 effective length of query: 910 effective length of database: 10,329,639 effective search space: 9399971490 effective search space used: 9399971490 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)