BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC34ZG10FM1.SCF screened BAC_end
         (911 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1807                                                        1221   0.0  

>3x_Contig1807 
          Length = 66587

 Score = 1221 bits (616), Expect = 0.0
 Identities = 763/804 (94%), Gaps = 6/804 (0%)
 Strand = Plus / Plus

                                                                         
Query: 87    tgttatcttaagagccgaatcgcagctgatgataggttcttgcgtgtgttgtagattatc 146
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59437 tgttatcttaagagccgaatcgcagctgatgataggttcttgcgtgtgttgtagattatc 59496

                                                                         
Query: 147   ctggaatgtatgcttggcctatgtaactcttccacataaatatgatctaaaaaataacac 206
             |||||||||||||||||||||||||||||| ||||| ||| | || | ||||||||||||
Sbjct: 59497 ctggaatgtatgcttggcctatgtaactctgccacagaaagaggagcgaaaaaataacac 59556

                                                                         
Query: 207   taaaagtatatcatgcgagatattcaaccttatacctatctatgactataataagtagat 266
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59557 gaaaagtatatcatgcgagatattcaaccttatacctatctatgactataataagtagat 59616

                                                                         
Query: 267   gcaacatctcccaaatgcaaatttcaaagccagaaccatgagtgtcttcctattgaagaa 326
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59617 gcaacatctcccaaatgcaaatttcaaagccagaaccatgagtgtcttcctattgaagaa 59676

                                                                         
Query: 327   ttaactgatctaactctgatgttagagcgttgcaatgtgctttgtccgctagtattattt 386
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59677 ttaactgatctaactctgatgttagagcgttgcaatgtgctttgtccgctagtattattt 59736

                                                                         
Query: 387   tgcatctttttaaagcgaataaggttcggtttacaattgtgaaggtgaagatggccgtat 446
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59737 tgcatctttttaaagcgaataaggttcggtttacaattgtgaaggtgaagatggccgtat 59796

                                                                         
Query: 447   ttttcttacttcacggttgggttagaagttcatagtgtggcctgaactaagcaacgtact 506
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59797 ttttcttacttcacggttgggttagaagttcatagtgtggcctgaactaagcaacgtact 59856

                                                                         
Query: 507   cgaaattaaattactgcacaaacttaaagggaaacaagtattctttatgaagagaagtca 566
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 59857 cgaaattaaattactgcacaaacttaaagggaaacaagtattctttaggaagagaagtca 59916

                                                                         
Query: 567   gcagaatccacagttttttatagacgatagcaactggcagt-cttttgactggaaattct 625
             |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 59917 gcagaatccacagtttttaatagacgatagcaactggcagtgcttttgactggaaattct 59976

                                                                         
Query: 626   cgcatttctattcattaat-attagaaaagacaccccagagtatcatagtttcacgagat 684
             ||||||||||||||| ||| ||||||||  ||||||||||||||||||||||||||||||
Sbjct: 59977 cgcatttctattcataaataattagaaagaacaccccagagtatcatagtttcacgagat 60036

                                                                         
Query: 685   cttttaaacagttgatcaactgggatcttccttttaccgggactcgtgattacgaagtat 744
             |||| |||||||||||||||| ||||||||| |||| | ||||||||||| |||||||||
Sbjct: 60037 ctttaaaacagttgatcaacttggatcttcc-tttagccggactcgtgataacgaagtat 60095

                                                                         
Query: 745   tatatcaagtttcg-aagttttacccatggatttaatagacatttccaatttgtttccta 803
             ||||||||||| || ||||||  ||||||||||||||||||| ||| |||| ||||||||
Sbjct: 60096 tatatcaagttccgaaagtttagcccatggatttaatagacaattcgaattcgtttccta 60155

                                                                         
Query: 804   acggaatttcttgaaagtgggtagggtgcatttggaaccgaacttattaacggtttttgg 863
             |||| || || ||||||  ||||||||||||||||||||| |||||| ||||| | || |
Sbjct: 60156 acgggatgtc-tgaaaggtggtagggtgcatttggaaccg-acttataaacgggtatttg 60213

                                     
Query: 864   ctggccgattaatagttcaaccta 887
             |||| |||| ||  ||||||||||
Sbjct: 60214 ctggtcgataaaatgttcaaccta 60237


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5985
Number of Sequences: 1807
Number of extensions: 5985
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 911
length of database: 10,358,551
effective HSP length: 16
effective length of query: 895
effective length of database: 10,329,639
effective search space: 9245026905
effective search space used: 9245026905
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)