BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC34ZH02FM1.SCF screened BAC_end (925 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1546 1461 0.0 >3x_Contig1546 Length = 12922 Score = 1461 bits (737), Expect = 0.0 Identities = 755/761 (99%) Strand = Plus / Minus Query: 86 aagatcattagtcaatgtcgaactgggcaccataatattgctatttaaagttttgccctg 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 952 aagatcattagtcaatgtcgaactgggcaccataatattgctatttaaagttttgccctg 893 Query: 146 tggtaaattcaatagatcaaatattctctcgttgtaaatttccaaataggatactctgac 205 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 892 tggtaaattcaatagttcaaatattctctcgttgtaaatttccaaataggatactctgac 833 Query: 206 agtaaactttttgctaggtaatcccacattgatacgatcgaaaatagtgtcaacgcacat 265 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 832 agtaaactttttgcgaggtaatcccacattgatacgatcgaaaatagtgtcaacgcacat 773 Query: 266 gggtattataccaggacctgatttggatccactcatggtatatgtcttacctgaaccagt 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 772 gggtattataccaggacctgatttggatccactcatggtatatgtcttacctgaaccagt 713 Query: 326 cataccataagcgaaaattgtacaattaaatccctcgaataatttatctatcataggcaa 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 712 cataccataagcgaaaattgtacaattaaatccctcgaataatttatctatcataggcaa 653 Query: 386 tgccatagtctcatatactcgatcgttattcatctccggactgaaaacatggtcgaagtt 445 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 652 tgccatagtgtcatatactcgatcgttattcatctccggactgaaaacatggtcgaagtt 593 Query: 446 aaattccccaaactcttcatgaataatggagttgttatttacgtgccaagaatcttgttt 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 592 aaattccccaaactcttcatgaataatggagttgttatttacgtgccaagaatcttgttt 533 Query: 506 tccatgagtaggcttgattcttacccctaccgaaatggtaccctggtatgaacttctccc 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 532 tccatgagtaggcttgattcttacccctaccgaaatggtaccctggtatgaacttctccc 473 Query: 566 gccacgaattggagaagcggccttcgtagaagaacttcttgctggtgaagaacattgact 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 472 gccacgaattggagaagcggccttcgtagaagaacttcttgctggtgaagaacattgact 413 Query: 626 cgaagatgacgaggaagttgatcttggccttactgttgatgaagttcttagatttggtgt 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 412 cgaagatgacgaggaagttgatcttggccttactgttgatgaagttcttagatttggtgt 353 Query: 686 gctgggaggtctcatcaatcttttgggtgaattgtacgatgatgtatggagtggaagtgc 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 352 gctgggaggtctcatcaatcttttgggtgaattgtacgatgatgtatggagtggaagtgc 293 Query: 746 cactggtttggtaatcatgatcgattggctatctcaagggtgtgttactctgctatattt 805 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 292 cactggtttggtaatcatgatcgattggctatctcaagggtgtgttactctgctatattt 233 Query: 806 tcgttgcaatgcaaatcctggcgtaatccattattgggtcc 846 ||||||||||||||||||| |||||||||| ||||| |||| Sbjct: 232 tcgttgcaatgcaaatccttgcgtaatccaatattgtgtcc 192 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5960 Number of Sequences: 1807 Number of extensions: 5960 Number of successful extensions: 50 Number of sequences better than 1.0e-20: 1 length of query: 925 length of database: 10,358,551 effective HSP length: 16 effective length of query: 909 effective length of database: 10,329,639 effective search space: 9389641851 effective search space used: 9389641851 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)