BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC34ZH05FM1.SCF screened BAC_end (946 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1791 1269 0.0 >3x_Contig1791 Length = 39945 Score = 1269 bits (640), Expect = 0.0 Identities = 677/688 (98%), Gaps = 1/688 (0%) Strand = Plus / Plus Query: 91 tctttgctgttgagaaagatcaccgtgaatggcagcaacatcgtaaccgttgtatttcaa 150 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6329 tctttgctgttgagaaagatcaccgtgaatggcagcaacatcgtaaccgttgtatttcaa 6388 Query: 151 gtttctttcaacacgagaggcttcctttttgtacaaggcaaatatcaaaactttgtcgtt 210 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6389 gtttctttcaacacgagaggcttcctttttgtacaaggcaaatatcaaaactttgtcgtt 6448 Query: 211 ctttgttgggcctgaatggtacttcttcaacagttccaacagttttttttcctttctgaa 270 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6449 ctttgttgggcctgaatggtacttcttcaacagttccaacagttttttttcctttctgaa 6508 Query: 271 cggatccacaacttccacgatctgagtaattcttttgtttgctgacagttcatctctgtt 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6509 cggatccacaacttccacgatctgagtaattcttttgtttgctgacagttcatctctgtt 6568 Query: 331 accaatagacactttaaccggttcactcatgaaacttgaagcaagttcacgaacttcttt 390 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6569 accaatagacactttaaccggttcactcatgaaacttgaagcaagttcacgaacttcttt 6628 Query: 391 tggccatgtcgcggtaaacatcaacgtttgtctagaggtggatcttgtttgtctaatgat 450 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6629 tggccatgtcgcggtaaacatcaacgtttgtctagaggtggatcttgtttgtctaatgat 6688 Query: 451 ttttttgatatcttcctcaaaacctttttccaacattctgtcagcttcatccaagaccag 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6689 ttttttgatatcttcctcaaaacctttttccaacattctgtcagcttcatccaagaccag 6748 Query: 511 gtagttaacatgactcaaatcaacagatccttcctctattagatccaacagtctacctgg 570 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 6749 gtagttaacatgactcaaatcaacagagccttcctctattagatccaacagtctacctgg 6808 Query: 571 agtagcaacaacgacttgggatctcctcagatcttctctttgctgatcctttggaacacc 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6809 agtagcaacaacgacttgggatctcctcagatcttctctttgctgatcctttggaacacc 6868 Query: 631 accgtatacgcaacaagatcttaaaccacacgcgttagtaagaacaatcaaattatcgta 690 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 6869 accgtatacgcaacaagatcttaaaccacacgcgtcagtaagaacaatcaaattatcgta 6928 Query: 691 aatttgaaagccaatttctctattttggtgagataacaagtaccttgacggaacttgact 750 ||||||| || | | ||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 6929 aatttgagaggccaattctcta-gttggtgagataacaagtaccttgacggaacttgact 6987 Query: 751 tgtcttcttatgtgacaatgttggtgat 778 ||||| || |||||||||||||| |||| Sbjct: 6988 tgtctcctgatgtgacaatgttgttgat 7015 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8233 Number of Sequences: 1807 Number of extensions: 8233 Number of successful extensions: 61 Number of sequences better than 1.0e-20: 1 length of query: 946 length of database: 10,358,551 effective HSP length: 16 effective length of query: 930 effective length of database: 10,329,639 effective search space: 9606564270 effective search space used: 9606564270 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)