BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC35ZB06RM1.SCF screened BAC_end (945 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1399 1463 0.0 >3x_Contig1399 Length = 7157 Score = 1463 bits (738), Expect = 0.0 Identities = 816/837 (97%), Gaps = 4/837 (0%) Strand = Plus / Minus Query: 43 tatctcgcaccccaatgtgatgggtctctacgaggtatgggaaaacaaatctgagttata 102 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4637 tatctcgcaccccaatgtgatgggtctctacgaggtatgggaaaacaaatctgagttata 4578 Query: 103 tttggtattggaatatgttgaaggtggtgaattgttcgactatttggtctcgaaggggaa 162 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4577 tttggtattggaatatgttgaaggtggtgaattgttcgactatttggtctcgaaggggaa 4518 Query: 163 gttgccggaaagtgaggctatccattatttcaaacagatagtacaagctgtatcatactg 222 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 4517 gttgccggaaagtgaggctatccattatttcaaacagatagtacaagctgtagcatactg 4458 Query: 223 ccatgggttcaatatttgtcatcgtgatttgaaaccagagaatttgcttttggataagaa 282 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4457 ccatgggttcaatatttgtcatcgtgatttgaaaccagagaatttgcttttggataagaa 4398 Query: 283 aaagagatctatcaagattgcagactttgggatggctgccctagagacttcggataaact 342 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4397 aaagagatctatcaagattgcagactttgggatggctgccctagagacttcggataaact 4338 Query: 343 gctggagacctcgtgtggctcaccacattatgcttctcctgaaatcgttctgggtcggaa 402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4337 gctggagacctcgtgtggctcaccacattatgcttctcctgaaatcgttctgggtcggaa 4278 Query: 403 atatcatggatccccaagtgatgtttggtcctgtggtatcatcttgttcgccctgttgac 462 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4277 atatcatggatccccaagtgatgtttggtcctgtggtatcatcttgttcgccctgttgac 4218 Query: 463 tggacatttaccctttaacgacgataacgtcaagaaattgttgttgaaagtacagtcagg 522 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4217 tggacatttaccctttaacgacgataacgtcaagaaattgttgttgaaagtacagtcagg 4158 Query: 523 ataatatcagatgccccaatggttatcggtagaggctaaagatttaatttctagaatcct 582 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4157 aaaatatcagatgccccaatggttatcggtagaggctaaagatttaatttctagaatcct 4098 Query: 583 ggtggtagatccaaatagaagaattactattgaccaaatcttacagcatgagttgctgac 642 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4097 ggtggtagatccaaatagaagaattactattgaccaaatcttacagcatgagttgctgac 4038 Query: 643 gaaatatgatcagaaatctcgcagtaagtctaatttcgatttgaatctgttgaatcgtac 702 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 4037 gaaatatgatcagaaatctcgcagtaagtctaattcggatttgaatctgttgaatcgtac 3978 Query: 703 tcc-aatattgtgagcttttcgtccgaaa-ggacatcgatgagacaatcttattc-acct 759 ||| |||||||||||||||||||| |||| ||||||||||||||||||||||| | |||| Sbjct: 3977 tccaaatattgtgagcttttcgtcggaaagggacatcgatgagacaatcttatccaacct 3918 Query: 760 acagatcctagggcacggtgctgcaaaaaaacatttgttgacaagacttttgaaaccagg 819 |||||||||| ||||||||||||||| ||||||||| ||||||||||| |||||||||| Sbjct: 3917 acagatcctatggcacggtgctgcaaggaaacatttggtgacaagacttatgaaaccagg 3858 Query: 820 att-actgnagagaaaatgttttattctttcctttggaattttctggggaaacaaca 875 ||| |||| ||||||||||||||||||||| || ||||||| || || ||||||||| Sbjct: 3857 attcactgaagagaaaatgttttattctttactatggaattatcaggagaaacaaca 3801 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6976 Number of Sequences: 1807 Number of extensions: 6976 Number of successful extensions: 69 Number of sequences better than 1.0e-20: 1 length of query: 945 length of database: 10,358,551 effective HSP length: 16 effective length of query: 929 effective length of database: 10,329,639 effective search space: 9596234631 effective search space used: 9596234631 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)