BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC35ZB08FM1.SCF screened BAC_end (917 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1640 932 0.0 >3x_Contig1640 Length = 15521 Score = 932 bits (470), Expect = 0.0 Identities = 579/610 (94%), Gaps = 4/610 (0%) Strand = Plus / Minus Query: 90 taccatctgcatgatacttggaggttcattcgattctggatcaattaacttcttttctcg 149 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2019 taccatctgcatgatacttggaggttcattcgattctggatcaattaacttcttttctcg 1960 Query: 150 catgatactgttaagattttccaaggattccacaatagatggatgggaatgaatctcgtc 209 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1959 catgatactgttaagattttccaaggattccacaatagatggatgggaatgaatctcgtc 1900 Query: 210 cataagtttctgttctttgacatgagcatccatatcctcgggtgatttgtcccatgacga 269 ||||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1899 cataagtgtctgtactttgacatgagcatccagatcctcgggtgatttgtcccatgacga 1840 Query: 270 agcatatctcttgttttgtagaagaggaatgattgttctacaacttctttgagcagtaac 329 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1839 agcatatctcttgttttgtagaagaggaatgattgttctacaacttctttgagcagtaac 1780 Query: 330 tgctccaaatgtggcagctcttagcccagaacggaatacagaacgcgataacatgttttc 389 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1779 tgctccaaatgtggcagctcttagcccagaacggaatacagaacgcgataacatgttttc 1720 Query: 390 tatatgaggattattgaagttccacagcaacaggaccggttaggtctcggatattctata 449 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1719 tatatgaggattattgaagttccacagcaacaggaccggttaggtctcggatattctata 1660 Query: 450 ttttcttaatttagtatgcaagcggaaagataattgcgctttcacatttttttgaaagtg 509 || ||| ||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1659 ttgtctgaatttagtatgcaagcggaaagataattgcgctttcacatttttttgaagttg 1600 Query: 510 ataaaatttcagacccttacatgatggactgttatcgaacaagagtctgaaagtattaat 569 ||||||||||||||| | ||||||||||||||||||||||| ||||||||| ||| |||| Sbjct: 1599 ataaaatttcagaccttaacatgatggactgttatcgaacaggagtctgaaggtaataat 1540 Query: 570 tgaaagtgagcaccgactattttcatttgagcctgcattatat-aacaaattgaacttc- 627 |||| ||||||||||||||||||||||||||| |||| ||||| ||||||| ||||| | Sbjct: 1539 tgaaggtgagcaccgactattttcatttgagcttgcaatatataaacaaatcgaactaca 1480 Query: 628 atgaattc-acaccctttgtaaagtatttacctttaattcaattcttaaattgggatatt 686 |||||||| ||||| | |||| |||||||||| | || | |||||| ||||| |||||| Sbjct: 1479 atgaattcaacaccatctgtagagtatttaccatagatacgattctt-aattgtgatatt 1421 Query: 687 ccaactttgg 696 ||||||||| Sbjct: 1420 acaactttgg 1411 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8356 Number of Sequences: 1807 Number of extensions: 8356 Number of successful extensions: 47 Number of sequences better than 1.0e-20: 1 length of query: 917 length of database: 10,358,551 effective HSP length: 16 effective length of query: 901 effective length of database: 10,329,639 effective search space: 9307004739 effective search space used: 9307004739 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)