BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC35ZB12RM1.SCF screened BAC_end
         (954 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1411                                                        1267   0.0  

>3x_Contig1411 
          Length = 7271

 Score = 1267 bits (639), Expect = 0.0
 Identities = 802/849 (94%), Gaps = 6/849 (0%)
 Strand = Plus / Minus

                                                                        
Query: 46   cttaaactgcatgcttagatagtgtcccaatttcctcttcgcctccgtggcttttacaat 105
            |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 2559 cttaaactgcatgcttagatagcgtcccaatttcctcttcgcctccgtggcttttacaat 2500

                                                                        
Query: 106  gtctgctttgaaataactataatataaaataataatttaataaactaatgatgttattgt 165
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2499 gtctgctttgaaataactataatataaaataataatttaataaactaatgatgttattgt 2440

                                                                        
Query: 166  acatacgatcccccaaaactcagtttaacgataagtatcaagaagaaacactgatccgga 225
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2439 acatacgatcccccaaaactcagtttaacgataagtatcaagaagaaacactgatccgga 2380

                                                                        
Query: 226  cagttctgtaagccagcctctcaaacgcttggttcacaacagcaactataccctgtacaa 285
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2379 cagttctgtaagccagcctctcaaacgcttggttcacaacagcaactataccctgtacaa 2320

                                                                        
Query: 286  ttactgcttgtcgtaagtgtattgtgtcattgtgcttttctcaacatcgattttaaaggt 345
            ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2319 ttactgcttgtcgtaggtgtattgtgtcattgtgcttttctcaacatcgattttaaaggt 2260

                                                                        
Query: 346  tcaaatgtcaaaaaacgtcaaaaagatggcatcttgccttatactagctattactcagat 405
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2259 tcaaatgtcaaaaaacgtcaaaaagatggcatcttgccttatactagctattactcagat 2200

                                                                        
Query: 406  aaacggatgcaagttttagggacaggaaacattaagatcagaagctgaaagtactggtca 465
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2199 aaacggatgcaagttttagggacaggaaacattaagatcagaagctgaaagtactggtca 2140

                                                                        
Query: 466  tggaattcggacacgatgcaaaacgtgtcagcataagatctttgttaggaaactatcttg 525
            ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 2139 tggaattcggacacgatgcaaaacgtgtcagcaaaagatctttgttaggaaactatcttg 2080

                                                                        
Query: 526  tgaagaagtacgagaatgtatttgcatcgatagacaatgctgttcctncaggggacaggg 585
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 2079 tgaagaagtacgagaatgtatttgcatcgatagacaatgctgttcctccaggggacaggg 2020

                                                                        
Query: 586  aaaagttgctatcgaataa-gacttggtgc-agggatagcgacctctttatttgatgcta 643
            ||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||
Sbjct: 2019 aaaagttgctatcgaataaggacttggtgcaaggaatagcgacctctttatttgatgcta 1960

                                                                        
Query: 644  cctgngaaaggttc-agacgatgagaggagatgattcgaagacaattgacgatgattttt 702
            |||| ||||||||| |||||||||||| ||||||| ||||||||||||||||||||||| 
Sbjct: 1959 cctgggaaaggttcaagacgatgagagaagatgatacgaagacaattgacgatgattttc 1900

                                                                        
Query: 703  aagagtttttcaacaacgaaacagatcttggagattattgatagtttctggaaagatgaa 762
            |||||| | |||||||||||||||||| | |||| || ||||||||||||||| ||||| 
Sbjct: 1899 aagagtatatcaacaacgaaacagatc-tcgagagtaatgatagtttctggaaggatgag 1841

                                                                        
Query: 763  aatttttaaacaggattttgaaatccgattcgttttttttgaaaaggagcgggaataacc 822
            || ||||| |||||| | ||| ||| ||| || || || |||| ||||||||||  ||||
Sbjct: 1840 aa-ttttagacaggagtatgagatcagatccgcttcttctgaagaggagcgggagaaacc 1782

                                                                        
Query: 823  gaatttcaagaaatcttttgaaaaccaagcaaaggtttcccgttgaaaaaacaggggaac 882
            |||| ||||||  ||| |   ||| ||||||||||  | |||||||| ||||| ||||||
Sbjct: 1781 gaatgtcaagacgtctctgagaaagcaagcaaagg-ataccgttgaagaaacaagggaac 1723

                     
Query: 883  attttattg 891
            |||| ||||
Sbjct: 1722 atttcattg 1714


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7774
Number of Sequences: 1807
Number of extensions: 7774
Number of successful extensions: 52
Number of sequences better than 1.0e-20: 1
length of query: 954
length of database: 10,358,551
effective HSP length: 16
effective length of query: 938
effective length of database: 10,329,639
effective search space: 9689201382
effective search space used: 9689201382
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)