BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC35ZB12RM1.SCF screened BAC_end (954 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1411 1267 0.0 >3x_Contig1411 Length = 7271 Score = 1267 bits (639), Expect = 0.0 Identities = 802/849 (94%), Gaps = 6/849 (0%) Strand = Plus / Minus Query: 46 cttaaactgcatgcttagatagtgtcccaatttcctcttcgcctccgtggcttttacaat 105 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 2559 cttaaactgcatgcttagatagcgtcccaatttcctcttcgcctccgtggcttttacaat 2500 Query: 106 gtctgctttgaaataactataatataaaataataatttaataaactaatgatgttattgt 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2499 gtctgctttgaaataactataatataaaataataatttaataaactaatgatgttattgt 2440 Query: 166 acatacgatcccccaaaactcagtttaacgataagtatcaagaagaaacactgatccgga 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2439 acatacgatcccccaaaactcagtttaacgataagtatcaagaagaaacactgatccgga 2380 Query: 226 cagttctgtaagccagcctctcaaacgcttggttcacaacagcaactataccctgtacaa 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2379 cagttctgtaagccagcctctcaaacgcttggttcacaacagcaactataccctgtacaa 2320 Query: 286 ttactgcttgtcgtaagtgtattgtgtcattgtgcttttctcaacatcgattttaaaggt 345 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2319 ttactgcttgtcgtaggtgtattgtgtcattgtgcttttctcaacatcgattttaaaggt 2260 Query: 346 tcaaatgtcaaaaaacgtcaaaaagatggcatcttgccttatactagctattactcagat 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2259 tcaaatgtcaaaaaacgtcaaaaagatggcatcttgccttatactagctattactcagat 2200 Query: 406 aaacggatgcaagttttagggacaggaaacattaagatcagaagctgaaagtactggtca 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2199 aaacggatgcaagttttagggacaggaaacattaagatcagaagctgaaagtactggtca 2140 Query: 466 tggaattcggacacgatgcaaaacgtgtcagcataagatctttgttaggaaactatcttg 525 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 2139 tggaattcggacacgatgcaaaacgtgtcagcaaaagatctttgttaggaaactatcttg 2080 Query: 526 tgaagaagtacgagaatgtatttgcatcgatagacaatgctgttcctncaggggacaggg 585 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 2079 tgaagaagtacgagaatgtatttgcatcgatagacaatgctgttcctccaggggacaggg 2020 Query: 586 aaaagttgctatcgaataa-gacttggtgc-agggatagcgacctctttatttgatgcta 643 ||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||| Sbjct: 2019 aaaagttgctatcgaataaggacttggtgcaaggaatagcgacctctttatttgatgcta 1960 Query: 644 cctgngaaaggttc-agacgatgagaggagatgattcgaagacaattgacgatgattttt 702 |||| ||||||||| |||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 1959 cctgggaaaggttcaagacgatgagagaagatgatacgaagacaattgacgatgattttc 1900 Query: 703 aagagtttttcaacaacgaaacagatcttggagattattgatagtttctggaaagatgaa 762 |||||| | |||||||||||||||||| | |||| || ||||||||||||||| ||||| Sbjct: 1899 aagagtatatcaacaacgaaacagatc-tcgagagtaatgatagtttctggaaggatgag 1841 Query: 763 aatttttaaacaggattttgaaatccgattcgttttttttgaaaaggagcgggaataacc 822 || ||||| |||||| | ||| ||| ||| || || || |||| |||||||||| |||| Sbjct: 1840 aa-ttttagacaggagtatgagatcagatccgcttcttctgaagaggagcgggagaaacc 1782 Query: 823 gaatttcaagaaatcttttgaaaaccaagcaaaggtttcccgttgaaaaaacaggggaac 882 |||| |||||| ||| | ||| |||||||||| | |||||||| ||||| |||||| Sbjct: 1781 gaatgtcaagacgtctctgagaaagcaagcaaagg-ataccgttgaagaaacaagggaac 1723 Query: 883 attttattg 891 |||| |||| Sbjct: 1722 atttcattg 1714 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7774 Number of Sequences: 1807 Number of extensions: 7774 Number of successful extensions: 52 Number of sequences better than 1.0e-20: 1 length of query: 954 length of database: 10,358,551 effective HSP length: 16 effective length of query: 938 effective length of database: 10,329,639 effective search space: 9689201382 effective search space used: 9689201382 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)