BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC35ZC07FM1.SCF screened BAC_end (921 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1488 1080 0.0 >3x_Contig1488 Length = 9807 Score = 1080 bits (545), Expect = 0.0 Identities = 620/637 (97%), Gaps = 6/637 (0%) Strand = Plus / Plus Query: 87 ttgaaagagaggtgagaactagttacacatcgtttcaccttctcaccgatcttcaaaaag 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5197 ttgaaagagaggtgagaactagttacacatcgtttcaccttctcaccgatcttcaaaaag 5256 Query: 147 acaacaatttcatctatgcttgagttatcaccttttggttctggtgctcctgtcatggga 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5257 acaacaatttcatctatgcttgagttatcaccttttggttctggtgctcctgtcatggga 5316 Query: 207 tgataatctacggatgaagcagaagagattcgagaaggctgtctttccattttaatgctt 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5317 tgataatctacggatgaagcagaagagattcgagaaggctgtctttccattttaatgctt 5376 Query: 267 tctgtatcagaaacattggccgctgctgccgctgcagcagcggctggaactgctaaattt 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5377 tctgtatcagaaacattggccgctgctgccgctgcagcagcggctggaactgctaaattt 5436 Query: 327 ttagacgttggggaattcgatggatctgaagctgtttggttggctaatttcgccatatga 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5437 ttagacgttggggaattcgatggatctgaagctgtttggttggctaatttcgccatatga 5496 Query: 387 tacgctgaaaacctcttcgaggctcttctttgcagattatttccctttttcaattgagtt 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5497 tacgctgaaaacctcttcgaggctcttctttgcagattatttccctttttcaattgagtt 5556 Query: 447 aacgcatcgctttcagaacccttgggaacttctaacgtaggtatctgttttgtttcaata 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5557 aacgcatcgctttcagaacccttgggaacttctaacgtaggtatctgttttgtttcaata 5616 Query: 507 tgagctgaagtagatgtcggtcccgcgccagccaaagatgtcgttgcgctgactaccgat 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 5617 tgagctgaagtagatgtcggtcccgcgccagccaaagatgtcgttgcgctgactacggat 5676 Query: 567 gaaacggaagaatcttgaagagtatgctgata-ttcaaagcatctt-attcctgctcagt 624 ||||||||||| |||| ||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 5677 gaaacggaagatctttgaggagtatgctgatatttcaaagcatcttcattcctgctcagt 5736 Query: 625 tttatcatcgcctgtttaacctt-agtttcttcaaga-ttttactattatatctttgatc 682 ||||||||||||||||||||||| ||||||| ||||| ||| ||||| |||||| ||||| Sbjct: 5737 tttatcatcgcctgtttaaccttaagtttctccaagagtttaactataatatctctgatc 5796 Query: 683 tgcgg-aagtatttattc-acctttcctcagatgcag 717 ||||| | |||||||||| || ||||||||||||||| Sbjct: 5797 tgcggtaggtatttattcaacgtttcctcagatgcag 5833 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7471 Number of Sequences: 1807 Number of extensions: 7471 Number of successful extensions: 56 Number of sequences better than 1.0e-20: 1 length of query: 921 length of database: 10,358,551 effective HSP length: 16 effective length of query: 905 effective length of database: 10,329,639 effective search space: 9348323295 effective search space used: 9348323295 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)