BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC35ZC10FM1.SCF screened BAC_end (935 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig383 892 0.0 >3x_Contig383 Length = 1103 Score = 892 bits (450), Expect = 0.0 Identities = 475/482 (98%), Gaps = 1/482 (0%) Strand = Plus / Minus Query: 86 tcctttggtgactaacaagtcatcagtagtctcttttaaagttgattgaagctctccatt 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 981 tcctttggtgactaacaagtcatcagtagtctcttttaaagttgattgaagctctccatt 922 Query: 146 catcacagtcaacttgtttaatttcaacaaaatttcatcacgagattgttttattccgtt 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 921 catcacagtcaacttgtttaatttcaacaaaatttcatcacgagattgttttattccgtt 862 Query: 206 catttctgttgtcaaagagtcaataatttgatcagcttcaactttcgcacttttcaatga 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 861 catttctgttgtcaaagagtcaataatttgatcagcttcaactttcgcacttttcaatga 802 Query: 266 atcgcatttttcatttaaggcatattcaatgcttgcccagtttttgttgctttcattcaa 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 801 atcgcatttttcatttaaggcatattcaatgcttgcccagtttttgttgctttcattcaa 742 Query: 326 ttcgtgctgtgctgctttgtattgggacataagtttgctgtacgcgtcatttgttgtatt 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 741 ttcgtgctgtgctgctttgtattgggacataagtttgctgtacgcgtcatttgttgtatt 682 Query: 386 gtcagtggtagttgagtcgccagattttgtattgatattttctaaatcgattctcaattg 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 681 gtcagtggtagttgagtcgccagattttgtattgatattttctaaatcgattctcaattg 622 Query: 446 ttccaaccgtatctctaacctgtcaacttcttcctttgaagttttcttcgagtgctttat 505 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 621 ttccaaccgtatctctaacctgtcaacttcttcctttgaag-tttcttcgagtgctttat 563 Query: 506 attttgattcgaacgtaccgtgcattttgtcctcgtgctctcttatttgcgataattcag 565 |||||||||||||||| | ||||||| ||| ||||||||||||||||| |||||||||| Sbjct: 562 attttgattcgaacgtccgttgcatttggtcttcgtgctctcttatttgtgataattcag 503 Query: 566 tg 567 || Sbjct: 502 tg 501 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 14,181 Number of Sequences: 1807 Number of extensions: 14181 Number of successful extensions: 100 Number of sequences better than 1.0e-20: 1 length of query: 935 length of database: 10,358,551 effective HSP length: 16 effective length of query: 919 effective length of database: 10,329,639 effective search space: 9492938241 effective search space used: 9492938241 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)