BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC35ZD03RM1.SCF screened BAC_end (961 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1256 1251 0.0 >3x_Contig1256 Length = 6519 Score = 1251 bits (631), Expect = 0.0 Identities = 713/735 (97%), Gaps = 4/735 (0%) Strand = Plus / Plus Query: 48 accctgtagactttagtaatgggagcgagcttagaaggattaacgatgcaataaaaaatg 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3295 accctgtagactttagtaatgggagcgagcttagaaggattaacgatgcaataaaaaatg 3354 Query: 108 aggcaattggatcgaatatctgcgatttaaagatcttggtcaataaagtagatatgataa 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3355 aggcaattggatcgaatatctgcgatttaaagatcttggtcaataaagtagatatgataa 3414 Query: 168 ctccgacagagccaagggtatctgccaaaacatgaaggaagatacctctcatgttgtcat 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3415 ctccgacagagccaagggtatctgccaaaacatgaaggaagatacctctcatgttgtcat 3474 Query: 228 tagattcatgttcgccgtgagcatggccatggtcaaatgcacatagacctacaacgttta 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3475 tagattcatgttcgccgtgagcatggccatggtcaaatgcacatagacctacaacgttta 3534 Query: 288 caagtaaccctaggatagaaactactaacaactcggtagttcctagtattgtgactggat 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3535 caagtaaccctaggatagaaactactaacaactcggtagttcctagtattgtgactggat 3594 Query: 348 taaatattctttggaatgattcaatgaaaatttcaataacaattccaatcaacaagaccc 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3595 taaatattctttggaatgattcaatgaaaatttcaataacaattccaatcaacaagaccc 3654 Query: 408 catttgtgaaacctgcaatagtctctaagtagcccaacgcaaaaggatacttgtcactag 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3655 catttgtgaaacctgcaatagtctctaagtagcccaacgcaaaaggatacttgtcactag 3714 Query: 468 cggggtattttgaaagcacgccagccaataaaccgagatatagatgagtacaatcgagag 527 |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 3715 cggggtattttgaaagcacgccagccaataaaccgagaaatagagaagtacaatcgagag 3774 Query: 528 ccatgtgtagcgagtcagataattatcccaatgacctggatctataggaatatagaagct 587 ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 3775 ccatgtgtagcgagtcagataataatcccaatgacctggatctaaaggaatatagaagct 3834 Query: 588 gaacaaacttgaatgctgaa-taagtaataggaaagataaaatggatttcgtctctttgt 646 |||||||| ||||||||||| |||||||||| ||||| |||||||||||||||||||||| Sbjct: 3835 gaacaaacatgaatgctgaattaagtaatagaaaagaaaaaatggatttcgtctctttgt 3894 Query: 647 ttgtgcctagact-ataagaagtttactagtagttagaaaatc-ttcttattctcaaaaa 704 ||||| ||||||| |||||||||||||||||||||||||| || |||| |||||||| || Sbjct: 3895 ttgtggctagactcataagaagtttactagtagttagaaattctttctcattctcaagaa 3954 Query: 705 gctctttatagtcatgagtttgccagtggggtggaaacggagggactatgttcttgttca 764 |||||||| |||||||||| ||| ||| |||||||||||||| |||||||||| |||||| Sbjct: 3955 gctctttagagtcatgagtatgcgagt-gggtggaaacggagtgactatgttcatgttca 4013 Query: 765 tgctcgtttatttgg 779 |||||||||| |||| Sbjct: 4014 tgctcgtttagttgg 4028 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6752 Number of Sequences: 1807 Number of extensions: 6752 Number of successful extensions: 42 Number of sequences better than 1.0e-20: 1 length of query: 961 length of database: 10,358,551 effective HSP length: 16 effective length of query: 945 effective length of database: 10,329,639 effective search space: 9761508855 effective search space used: 9761508855 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)