BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC35ZD09RM1.SCF screened BAC_end (980 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1604 926 0.0 >3x_Contig1604 Length = 15703 Score = 926 bits (467), Expect = 0.0 Identities = 511/523 (97%), Gaps = 2/523 (0%) Strand = Plus / Plus Query: 48 tgatattgaagaatggtgacgtcaatgccagtgtagaatgggttttctcccatatggatg 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12800 tgatattgaagaatggtgacgtcaatgccagtgtagaatgggttttctcccatatggatg 12859 Query: 108 acgacggggagttacctgaagctgaggaatggaaggatcaatccagaaaaagttttggaa 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12860 acgacggggagttacctgaagctgaggaatggaaggatcaatccagaaaaagttttggaa 12919 Query: 168 tcccagcatcgtcaattgcctctgctaagtataaactgactgctgtcatatgccataaag 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12920 tcccagcatcgtcaattgcctctgctaagtataaactgactgctgtcatatgccataaag 12979 Query: 228 gtaattcagttcacagtggccattacgttgcatttattaagaaagtggtcgaaggaaaag 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12980 gtaattcagttcacagtggccattacgttgcatttattaagaaagtggtcgaaggaaaag 13039 Query: 288 aacaatgggttctctacaacgatgaaaaaattctcttggccaacgatgaaccaaatttcg 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13040 aacaatgggttctctacaacgatgaaaaaattctcttggccaacgatgaaccaaatttcg 13099 Query: 348 aggacatagaaaagaatggctacatgtttttcttcaaccttgaagaataagaagcatctc 407 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 13100 aggacatagaaaagaatggctacatgtttttcttcaaccttgaagaataagaggcatctc 13159 Query: 408 ctctctaaataaaagagacatgcatcacaacatgaaactctaaaaaaataggacttgccc 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13160 ctctctaaataaaagagacatgcatcacaacatgaaactctaaaaaaataggacttgccc 13219 Query: 468 accttcctatctgcattgggtattcaacgatatggttgtgggtccat-ttttcata-ata 525 |||||||||||||||||||||||||||||||||||||||| |||||| | | |||| ||| Sbjct: 13220 accttcctatctgcattgggtattcaacgatatggttgtgtgtccatatatacatatata 13279 Query: 526 ttctcgtccatgactcaattcatttcattttggtgggcttatt 568 | ||||| |||||||||||||| | || | ||||||||||||| Sbjct: 13280 tcctcgtacatgactcaattcaatacagtatggtgggcttatt 13322 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 16,681 Number of Sequences: 1807 Number of extensions: 16681 Number of successful extensions: 83 Number of sequences better than 1.0e-20: 1 length of query: 980 length of database: 10,358,551 effective HSP length: 16 effective length of query: 964 effective length of database: 10,329,639 effective search space: 9957771996 effective search space used: 9957771996 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)