BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC35ZE01FM1.SCF screened BAC_end (937 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1575 1495 0.0 >3x_Contig1575 Length = 11952 Score = 1495 bits (754), Expect = 0.0 Identities = 802/814 (98%), Gaps = 3/814 (0%) Strand = Plus / Minus Query: 86 tagctgtcctaccgtaaagtttgaaactggttttgccaacatagaaaacaatccaggccg 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5962 tagctgtcctaccgtaaagtttgaaactggttttgccaacatagaaaacaatccaggccg 5903 Query: 146 gttctcagtcccacgcatttcatagtacgcgtcagtataggtaaaatccaaaaaaaaaaa 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5902 gttctcagtcccacgcatttcatagtacgcgtcagtataggtaaaatccaaaaaaaaaaa 5843 Query: 206 aagttgaagatttcagaatattagcatagaggccaaaatccaacaaaaattatactctat 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5842 aagttgaagatttcagaatattagcatagaggccaaaatccaacaaaaattatactctat 5783 Query: 266 actttgcgtaggcatattttgccatactgaaaaagttccattttttttttttttaatgtt 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5782 actttgcgtaggcatattttgccatactgaaaaagttccattttttttttttttaatgtt 5723 Query: 326 ttaccctaaccaactgattcttttcaaagaaaaaatcatattcaagtcccacagaaaaga 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5722 ttaccctaaccaactgattcttttcaaagaaaaaatcatattcaagtcccacagaaaaga 5663 Query: 386 gggtagggtaaatctgccatatccttcaatttagatggaattggcggctaaaagacgaat 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5662 gggtagggtaaatctgccatatccttcaatttagatggaattggcggctaaaagacgaat 5603 Query: 446 tccatgaaatatagagaaacagcaagaaataatgccatctaagctatattgtaaacctcg 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5602 tccatgaaatatagagaaacagcaagaaataatgccatctaagctatattgtaaacctcg 5543 Query: 506 tagataagtttgatagaaacgatcaatcagattggaaaggaggcaaagttagagggtttc 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5542 tagataagtttgatagaaacgatcaatcagattggaaaggaggcaaagttagagggtttc 5483 Query: 566 ttagggaaggcggtctcttaattcctgtcacgtggcaataaattccctttcgattcttca 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5482 ttagggaaggcggtctcttaattcctgtcacgtggcaataaattccctttcgattcttca 5423 Query: 626 tacaactgtgagttggtactctcttttctgaagtcctgcttcaaaagatactggtagttt 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5422 tacaactgtgagttggtactctcttttctgaagtcctgcttcaaaagatactggtagttt 5363 Query: 686 gttgacacatacttatctgagttctaactagctagttttgggaaagttttgggtttggtt 745 ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 5362 gttgacacatacttatctgagttctaactagctag-tttgggaaagtttt-ggtttggtt 5305 Query: 746 tgaccagcgacaatacttagaaatggtcagtgtcttggcgacttcagtttacaccattta 805 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 5304 tgaccagcgacaatacttagaaatggtcagtgtcttggcgacttcagtttacacaattta 5245 Query: 806 cccttctgtctcttaaatgtatcgctttataaattctgattcctattaattgggacttcc 865 ||||||||||||||| ||||||||||||||| ||||||||||||||| | | |||||||| Sbjct: 5244 cccttctgtctcttatatgtatcgctttatatattctgattcctatttaattggacttcc 5185 Query: 866 tgtccttttatattggccggcatgaaccactttt 899 |||||||| ||||| |||| |||| ||||||||| Sbjct: 5184 tgtcctttcatatttgccgccatg-accactttt 5152 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 22,644 Number of Sequences: 1807 Number of extensions: 22644 Number of successful extensions: 522 Number of sequences better than 1.0e-20: 1 length of query: 937 length of database: 10,358,551 effective HSP length: 16 effective length of query: 921 effective length of database: 10,329,639 effective search space: 9513597519 effective search space used: 9513597519 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)