BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC35ZE03RM1.SCF screened BAC_end (906 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1705 1469 0.0 >3x_Contig1705 Length = 16734 Score = 1469 bits (741), Expect = 0.0 Identities = 801/817 (98%), Gaps = 3/817 (0%) Strand = Plus / Plus Query: 47 ttttcctctcggagttaatagaatggatatatatgtgaataaatgtctacatcaagttca 106 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 11447 ttttcctctcggagttaagagaatggatatatatgtgaataaatgtctacatcaagttca 11506 Query: 107 tacttctagctgttaatactggaaagtaaagaggctagcctttgctaattgaccgacaaa 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11507 tacttctagctgttaatactggaaagtaaagaggctagcctttgctaattgaccgacaaa 11566 Query: 167 taaagacaacatctcacaaatccaggactaatgactacagcaactgctgctccaaaatta 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11567 taaagacaacatctcacaaatccaggactaatgactacagcaactgctgctccaaaatta 11626 Query: 227 ctgtttctgcaaggcttcttacaaaatggtaaagtcttcagtgagaagtcttctggtatt 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11627 ctgtttctgcaaggcttcttacaaaatggtaaagtcttcagtgagaagtcttctggtatt 11686 Query: 287 agaaagctactgaagaaatctaatgttcaatgtgattacatggatgcgccagtgatcctt 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11687 agaaagctactgaagaaatctaatgttcaatgtgattacatggatgcgccagtgatcctt 11746 Query: 347 gaaaagaaagacttgcctttcgaaatggacgatgcaaagtggcaagaaacccttaatgca 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11747 gaaaagaaagacttgcctttcgaaatggacgatgcaaagtggcaagaaacccttaatgca 11806 Query: 407 ggtgttaacagagcatggttctatcatagcgacatctcatctgaattggatttaagccca 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11807 ggtgttaacagagcatggttctatcatagcgacatctcatctgaattggatttaagccca 11866 Query: 467 gctattgaagctgtcactaaatatatcaaggataatggtccatacgacggtattgttggg 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11867 gctattgaagctgtcactaaatatatcaaggataatggtccatacgacggtattgttggg 11926 Query: 527 tttagtcaaggtgctgcattggcttctatcatcactaacaaaatcaccgaattggtccca 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11927 tttagtcaaggtgctgcattggcttctatcatcactaacaaaatcaccgaattggtccca 11986 Query: 587 tctcatcctcagttcaaggtgtccttgttgatcgctgcttactctttcactgaaccagat 646 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11987 tctcatcctcagttcaaggtgtccttgttgatcgctgcttactctttcactgaaccagat 12046 Query: 647 ccagaaaatgagggacaattaagaatctctc-aaaatttcaagattcttttaaacctatg 705 ||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||| Sbjct: 12047 ccagaaaatgagggacaattaagaatctctcaaaaattccaagattctttcaaacctatg 12106 Query: 706 gatgaccgtactaccaagatgctgtttgtttattgtaccgaagatatggctgttccatgt 765 ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| Sbjct: 12107 gatgaccgtactaccaagatgctgtttgtttatggtaccgcagatatggctgttccatgt 12166 Query: 766 gaaagagcgaagt-tttattacacatttacactaaaggtcaagagttagatgactgtaag 824 ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 12167 gaaagagcgaagtatttatacaacatttacactaaaggtcaagagttagatgactgtaag 12226 Query: 825 gcttat-aacatccagttggtcatttgggttcaaaca 860 |||||| | ||||||| ||||||| ||| | |||||| Sbjct: 12227 gcttatgagcatccaggtggtcatatggttccaaaca 12263 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6722 Number of Sequences: 1807 Number of extensions: 6722 Number of successful extensions: 48 Number of sequences better than 1.0e-20: 1 length of query: 906 length of database: 10,358,551 effective HSP length: 16 effective length of query: 890 effective length of database: 10,329,639 effective search space: 9193378710 effective search space used: 9193378710 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)