BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC35ZE08FM1.SCF screened BAC_end (957 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1394 1296 0.0 >3x_Contig1394 Length = 5721 Score = 1296 bits (654), Expect = 0.0 Identities = 680/686 (99%), Gaps = 2/686 (0%) Strand = Plus / Minus Query: 87 taccgttccaacactgacgaaaagtacttgtgtacttggggtattgacagtgcctacgtc 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 856 taccgttccaacactgacgaaaagtacttgtgtacttggggtattgacagtgcctacgtc 797 Query: 147 gttaacgaattgtctgacgtcgtctccatctgtagaaccgattacccaggtactgaaaac 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 796 gttaacgaattgtctgacgtcgtctccatctgtagaaccgattacccaggtactgaaaac 737 Query: 207 atggttatcccaactattgtcaacggtggtagcaagttaccattgaccgttgtcgaccag 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 736 atggttatcccaactattgtcaacggtggtagcaagttaccattgaccgttgtcgaccag 677 Query: 267 gatacatactacacatggcaaggaatgaagacatcggctcaatactacgttaacaatgct 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 676 gatacatactacacatggcaaggaatgaagacatcggctcaatactacgttaacaatgct 617 Query: 327 ggtgtttctaaggaggatggttgtgtctggggtacttctgggtctggtattggtaactgg 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 616 ggtgtttctaaggaggatggttgtgtctggggtacttctgggtctggtattggtaactgg 557 Query: 387 gctccattgaacttcggtgctggtgccactggcggtatctcttatctgtctttgattcca 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 556 gctccattgaacttcggtgctggtgccactggcggtatctcttatctgtctttgattcca 497 Query: 447 aacccaaacaaccgtgaagcagccaacttcaacgtcaagattgttgcagctgacggtggt 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 496 aacccaaacaaccgtgaagcagccaacttcaacgtcaagattgttgcagctgacggtggt 437 Query: 507 agcgtcatcggagaatgtgtttacgaaaacggttcctacaacggtggtagcgatggttgt 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 436 agcgtcatcggagaatgtgtttacgaaaacggttcctacaacggtggtagcgatggttgt 377 Query: 567 accgtttcagtgacttctggtgctgctaatttcgttttatacgattaatgactcttttca 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 376 accgtttcagtgacttctggtgctgctaatttcgttttatacgattaatgactcttttca 317 Query: 627 gatgcattggcgggatgttatttaccgttgctgtttttcttttcttccctagtctgctat 686 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 316 gaggcattggcgggatgttatttaccgttgctgtttttcttttcttccctagtctgctat 257 Query: 687 ctgaattctttgtatctgtcaaaaattgaaatgaaactaacatcattaatggtgtcatgt 746 |||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 256 ctgaatcctctgtatctgtcaaaaattgaaatggaactaacatcattaatggtgtcatgt 197 Query: 747 tgtggcgtgtggtgcatatttttgtg 772 ||| |||||| ||||||||||||||| Sbjct: 196 tgt-gcgtgt-gtgcatatttttgtg 173 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6528 Number of Sequences: 1807 Number of extensions: 6528 Number of successful extensions: 49 Number of sequences better than 1.0e-20: 1 length of query: 957 length of database: 10,358,551 effective HSP length: 16 effective length of query: 941 effective length of database: 10,329,639 effective search space: 9720190299 effective search space used: 9720190299 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)