BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC35ZE09FM1.SCF screened BAC_end
         (945 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1757                                                        1195   0.0  

>3x_Contig1757 
          Length = 24754

 Score = 1195 bits (603), Expect = 0.0
 Identities = 644/655 (98%), Gaps = 2/655 (0%)
 Strand = Plus / Minus

                                                                         
Query: 87    tatcatcattagttagattcagtggcttaaaatataaactgtaaaagtgatttcattcgt 146
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15250 tatcatcattagttagattcagtggcttaaaatataaactgtaaaagtgatttcattcgt 15191

                                                                         
Query: 147   atatgaggtttttttgaagagttttttaaacattatatggtaccagtaccttctgggatt 206
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15190 atatgaggtttttttgaagagttttttaaacattatatggtaccagtaccttctgggatt 15131

                                                                         
Query: 207   attatatcattgtgtagagttcaaccctcaattgacttacttttgaatctaaagacttta 266
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15130 attatatcattgtgtagagttcaaccctcaattgacttacttttgaatctaaagacttta 15071

                                                                         
Query: 267   tttgctgcgcgactggtttataaggtgtgctaatagagatctccaagacaaaaatacaga 326
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15070 tttgctgcgcgactggtttataaggtgtgctaatagagatctccaagacaaaaatacaga 15011

                                                                         
Query: 327   taatgggaattgtgtccgtcgtgcaggatttcttctcgctagagactctagatcaacgtt 386
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15010 taatgggaattgtgtccgtcgtgcaggatttcttctcgctagagactctagatcaacgtt 14951

                                                                         
Query: 387   tgacggcacctacgaatgattctcgtcgtaaacagaaattggggccagaaattcaatcta 446
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14950 tgacggcacctacgaatgattctcgtcgtaaacagaaattggggccagaaattcaatcta 14891

                                                                         
Query: 447   gatggtcgtcattagaattcaaggcttattggttaatcttgtgtatagtgctaccgttga 506
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14890 gatggtcgtcattagaattcaaggcttattggttaatcttgtgtatagtgctaccgttga 14831

                                                                         
Query: 507   tgcttaaggcaggaatggatgctactaactcatggaattcaaactattacaagtaccagc 566
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14830 tgcttaaggcaggaatggatgctactaactcatggaattcaaactattacaagtaccagc 14771

                                                                         
Query: 567   atttgttgagtaatggatggatgttcggatagaaagttgataacagcgatgcccagtata 626
             ||||||||||||| |||||||||||||||   ||||||||||||||||||||||||||||
Sbjct: 14770 atttgttgagtaagggatggatgttcggaagaaaagttgataacagcgatgcccagtata 14711

                                                                         
Query: 627   gattttttagagataatctattgttactgggtgggtctgatggtacttcatttatttatc 686
             |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 14710 gattttttagagataatctattgttact-ggtgggtctgatggtacttcatttatctatc 14652

                                                                    
Query: 687   aagaaagctgtgctccaattttaccttgtacaaaaggtgacgtttggatttttgg 741
             |||||||||||||||||||||  |  ||||||||||||||||||| |||||||||
Sbjct: 14651 aagaaagctgtgctccaatttaccaatgtacaaaaggtgacgttt-gatttttgg 14598


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7538
Number of Sequences: 1807
Number of extensions: 7538
Number of successful extensions: 62
Number of sequences better than 1.0e-20: 1
length of query: 945
length of database: 10,358,551
effective HSP length: 16
effective length of query: 929
effective length of database: 10,329,639
effective search space: 9596234631
effective search space used: 9596234631
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)