BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC35ZE09FM1.SCF screened BAC_end (945 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1757 1195 0.0 >3x_Contig1757 Length = 24754 Score = 1195 bits (603), Expect = 0.0 Identities = 644/655 (98%), Gaps = 2/655 (0%) Strand = Plus / Minus Query: 87 tatcatcattagttagattcagtggcttaaaatataaactgtaaaagtgatttcattcgt 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15250 tatcatcattagttagattcagtggcttaaaatataaactgtaaaagtgatttcattcgt 15191 Query: 147 atatgaggtttttttgaagagttttttaaacattatatggtaccagtaccttctgggatt 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15190 atatgaggtttttttgaagagttttttaaacattatatggtaccagtaccttctgggatt 15131 Query: 207 attatatcattgtgtagagttcaaccctcaattgacttacttttgaatctaaagacttta 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15130 attatatcattgtgtagagttcaaccctcaattgacttacttttgaatctaaagacttta 15071 Query: 267 tttgctgcgcgactggtttataaggtgtgctaatagagatctccaagacaaaaatacaga 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15070 tttgctgcgcgactggtttataaggtgtgctaatagagatctccaagacaaaaatacaga 15011 Query: 327 taatgggaattgtgtccgtcgtgcaggatttcttctcgctagagactctagatcaacgtt 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15010 taatgggaattgtgtccgtcgtgcaggatttcttctcgctagagactctagatcaacgtt 14951 Query: 387 tgacggcacctacgaatgattctcgtcgtaaacagaaattggggccagaaattcaatcta 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14950 tgacggcacctacgaatgattctcgtcgtaaacagaaattggggccagaaattcaatcta 14891 Query: 447 gatggtcgtcattagaattcaaggcttattggttaatcttgtgtatagtgctaccgttga 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14890 gatggtcgtcattagaattcaaggcttattggttaatcttgtgtatagtgctaccgttga 14831 Query: 507 tgcttaaggcaggaatggatgctactaactcatggaattcaaactattacaagtaccagc 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14830 tgcttaaggcaggaatggatgctactaactcatggaattcaaactattacaagtaccagc 14771 Query: 567 atttgttgagtaatggatggatgttcggatagaaagttgataacagcgatgcccagtata 626 ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 14770 atttgttgagtaagggatggatgttcggaagaaaagttgataacagcgatgcccagtata 14711 Query: 627 gattttttagagataatctattgttactgggtgggtctgatggtacttcatttatttatc 686 |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| Sbjct: 14710 gattttttagagataatctattgttact-ggtgggtctgatggtacttcatttatctatc 14652 Query: 687 aagaaagctgtgctccaattttaccttgtacaaaaggtgacgtttggatttttgg 741 ||||||||||||||||||||| | ||||||||||||||||||| ||||||||| Sbjct: 14651 aagaaagctgtgctccaatttaccaatgtacaaaaggtgacgttt-gatttttgg 14598 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7538 Number of Sequences: 1807 Number of extensions: 7538 Number of successful extensions: 62 Number of sequences better than 1.0e-20: 1 length of query: 945 length of database: 10,358,551 effective HSP length: 16 effective length of query: 929 effective length of database: 10,329,639 effective search space: 9596234631 effective search space used: 9596234631 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)