BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC35ZE09RM1.SCF screened BAC_end (927 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1700 1003 0.0 >3x_Contig1700 Length = 16332 Score = 1003 bits (506), Expect = 0.0 Identities = 549/558 (98%), Gaps = 4/558 (0%) Strand = Plus / Minus Query: 48 cctcgtttctctagtctacctcatatactttctttttttctttttccggttttaatttgg 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4744 cctcgtttctctagtctacctcatatactttctttttttctttttccggttttaatttgg 4685 Query: 108 gtttttaagtggatcatgctcgaagctcgaagatgcacacggctgaaccgtgttgaaaga 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4684 gtttttaagtggatcatgctcgaagctcgaagatgcacacggctgaaccgtgttgaaaga 4625 Query: 168 gagagacaagggaaaaaccagtgtagtttccgtagtaccaaggctaagccaaaccggtgg 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4624 gagagacaagggaaaaaccagtgtagtttccgtagtaccaaggctaagccaaaccggtgg 4565 Query: 228 ggtactctaaggaatggagggagaaatgggaaaaaaagaaaaacaggggctgaattaggc 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4564 ggtactctaaggaatggagggagaaatgggaaaaaaagaaaaacaggggctgaattaggc 4505 Query: 288 aaaataatccactaggaagaatggtagttatgtatgtatttatctgtgtcatcgagaggt 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4504 aaaataatccactaggaagaatggtagttatgtatgtatttatctgtgtcatcgagaggt 4445 Query: 348 attttttcaattttaacttcttttttttgtttttccttttgttcctctcagtgtctgtga 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4444 attttttcaattttaacttcttttttttgtttttccttttgttcctctcagtgtctgtga 4385 Query: 408 gggaaaaactgggagcgatgtagtagcttttg-aatacgtaatcttcaagatcccattag 466 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 4384 gggaaaaactgggagcgatgtagtagcttttgaaatacgtaatcttcaagatcccattag 4325 Query: 467 ttttttgattatcttatccaagacagggacacaggtatgttttcatttggtgcctgccgc 526 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 4324 -tttttgattatcttatccaagacagggacacaggtatg-tttcatttggtgcctgcggc 4267 Query: 527 actaattttttcttgggttacttgtatttcaatcttttgactattaatgcttttgctatc 586 ||||| |||||||||| |||||||||||||| |||||||||||||||||||| ||||||| Sbjct: 4266 actaa-tttttcttggtttacttgtatttcagtcttttgactattaatgcttctgctatc 4208 Query: 587 ctgctgggccttaaattt 604 ||||||||||| |||||| Sbjct: 4207 ctgctgggcctaaaattt 4190 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9893 Number of Sequences: 1807 Number of extensions: 9893 Number of successful extensions: 125 Number of sequences better than 1.0e-20: 1 length of query: 927 length of database: 10,358,551 effective HSP length: 16 effective length of query: 911 effective length of database: 10,329,639 effective search space: 9410301129 effective search space used: 9410301129 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)