BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC35ZE11RM1.SCF screened BAC_end (938 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1604 1197 0.0 >3x_Contig1604 Length = 15703 Score = 1197 bits (604), Expect = 0.0 Identities = 657/671 (97%), Gaps = 3/671 (0%) Strand = Plus / Plus Query: 47 tgatattgaagaatggtgacgtcaatgccagtgtagaatgggttttctcccatatggatg 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12800 tgatattgaagaatggtgacgtcaatgccagtgtagaatgggttttctcccatatggatg 12859 Query: 107 acgacggggagttacctgaagctgaggaatggaaggatcaatccagaaaaagttttggaa 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12860 acgacggggagttacctgaagctgaggaatggaaggatcaatccagaaaaagttttggaa 12919 Query: 167 tcccagcatcgtcaattgcctctgctaagtataaactgactgctgtcatatgccataaag 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12920 tcccagcatcgtcaattgcctctgctaagtataaactgactgctgtcatatgccataaag 12979 Query: 227 gtaattcagttcacagtggccattacgttgcatttattaagaaagtggtcgaaggaaaag 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12980 gtaattcagttcacagtggccattacgttgcatttattaagaaagtggtcgaaggaaaag 13039 Query: 287 aacaatgggttctctacaacgatgaaaaaattctcttggccaacgatgaaccaaatttcg 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13040 aacaatgggttctctacaacgatgaaaaaattctcttggccaacgatgaaccaaatttcg 13099 Query: 347 aggacatagaaaagaatggctacatgtttttcttcaaccttgaagaataagaggcatctc 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13100 aggacatagaaaagaatggctacatgtttttcttcaaccttgaagaataagaggcatctc 13159 Query: 407 ctctctaaataaaagagacatgcatcacaacatgaaactctaaaaaaataggacttgccc 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13160 ctctctaaataaaagagacatgcatcacaacatgaaactctaaaaaaataggacttgccc 13219 Query: 467 accttcctatctgcattgggtattcaacgatatggttgtgtgtccatatatacatatata 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13220 accttcctatctgcattgggtattcaacgatatggttgtgtgtccatatatacatatata 13279 Query: 527 tcctcgtacatgactcaattcaatacagtatggtgggcttattcctatttatagccgttt 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||| || || Sbjct: 13280 tcctcgtacatgactcaattcaatacagtatggtgggcttattcctatttatag-cggtt 13338 Query: 587 cctgtctggaagcagttgtgtccagccattgcaggtcacgtgaatatgcttcatgaattc 646 |||||||||| |||||||||||||||||||||| |||||||||||||||||||||| | | Sbjct: 13339 cctgtctggaggcagttgtgtccagccattgcaagtcacgtgaatatgcttcatgattcc 13398 Query: 647 ctgaaaat-aaacatgtcagatcctcccttaaaaataaagcaaactaaatccattttttt 705 |||||||| |||||||||||||| |||||||||||||||||||||| || || || ||| Sbjct: 13399 ctgaaaatgaaacatgtcagatctgcccttaaaaataaagcaaactagat-caattattt 13457 Query: 706 accagngacag 716 ||||| ||||| Sbjct: 13458 accagtgacag 13468 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8177 Number of Sequences: 1807 Number of extensions: 8177 Number of successful extensions: 98 Number of sequences better than 1.0e-20: 1 length of query: 938 length of database: 10,358,551 effective HSP length: 16 effective length of query: 922 effective length of database: 10,329,639 effective search space: 9523927158 effective search space used: 9523927158 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)