BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC35ZF04FM1.SCF screened BAC_end (956 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1715 1336 0.0 >3x_Contig1715 Length = 16241 Score = 1336 bits (674), Expect = 0.0 Identities = 780/800 (97%), Gaps = 12/800 (1%) Strand = Plus / Minus Query: 86 tgttgaaacaagaattcatcgccaaatatataccgaaagaatttgatatttcaaaggata 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1490 tgttgaaacaagaattcatcgccaaatatataccgaaagaatttgatatttcaaaggata 1431 Query: 146 agatatttgtcacttctacctctttcacaccggacgaagatatctcagtattaatcggat 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1430 agatatttgtcacttctacctctttcacaccggacgaagatatctcagtattaatcggat 1371 Query: 206 ccttcaagatatatgaaaattcattccaaaagtttgatcagactttgcctcgaatcttgt 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1370 ccttcaagatatatgaaaattcattccaaaagtttgatcagactttgcctcgaatcttgt 1311 Query: 266 gtttcatcactgggaagggcccattgcaagaaaagattgtaaaacaggtacaggatttca 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1310 gtttcatcactgggaagggcccattgcaagaaaagattgtaaaacaggtacaggatttca 1251 Query: 326 aatgggaccgcgtccaggtcgaattcttatggctatcatcagaagattatcctaagctat 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1250 aatgggaccgcgtccaggtcgaattcttatggctatcatcagaagattatcctaagctat 1191 Query: 386 taaggttgtgtgactatggggtatcgttacatacttcaagctcggggcttgatttaccta 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1190 taaggttgtgtgactatggggtatcgttacatacttcaagctcggggcttgatttaccta 1131 Query: 446 tgaaaatccttgatatgttcggttctgggttacctgtcatctgtatgaattatcccgtat 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1130 tgaaaatccttgatatgttcggttctgggttacctgtcatctgtatgaattatcccgtat 1071 Query: 506 tggacgaacttgttcaacagaatgttaatgggttgaaatttgcagatagacgtgagttgc 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1070 tggacgaacttgttcaacagaatgttaatgggttgaaatttgcagatagacgtgagttgc 1011 Query: 566 atgaagctcttatattttcggtgaaagatgaacaggttcatcaggagatcaaaagaggtg 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1010 atgaagctcttatattttcggtgaaagatgaacaggttcatcaggagatcaaaagaggtg 951 Query: 626 cccttagagaaagcannaatagatggaatgaaaagttgggaatccgcgttgtctgaattg 685 ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 950 cccttagagaaagcaaaaatagatggaatg-aaagttgggaatccgcgttgtctgaattg 892 Query: 686 aagattattcataagtgataaaattgcttcagctctttcatgtgggagtttctttattgt 745 ||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||| Sbjct: 891 aagattattcataagtgataaaattgcttcagctcttcaatgt-ggagtttc-ttattgt 834 Query: 746 cattttgcagactcgtttttttgttctccgtcatttgtcgtagggaccaatatctataat 805 ||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 833 cattttgcagactcg-ttttttgttctccgtca-ttgtcgta-ggaccaatatctataat 777 Query: 806 tctcatccctggataacctcaatggattccatgatcctcgtaataaaaacttcacttatc 865 |||||||| || || | ||||||| ||| |||||| |||||||| |||||||||| |||| Sbjct: 776 tctcatccttgtat-agctcaatgaatt-catgat-ctcgtaat-aaaacttcac-tatc 722 Query: 866 gtcttctgggaatagaagaa 885 ||||||| |||||||||||| Sbjct: 721 gtcttct-ggaatagaagaa 703 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7326 Number of Sequences: 1807 Number of extensions: 7326 Number of successful extensions: 62 Number of sequences better than 1.0e-20: 1 length of query: 956 length of database: 10,358,551 effective HSP length: 16 effective length of query: 940 effective length of database: 10,329,639 effective search space: 9709860660 effective search space used: 9709860660 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)