BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC35ZF04RM1.SCF screened BAC_end (949 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig922 674 0.0 3x_Contig1446 168 1e-41 3x_Contig1396 159 1e-38 3x_Contig631 159 1e-38 3x_Contig904 155 2e-37 >3x_Contig922 Length = 4170 Score = 674 bits (340), Expect = 0.0 Identities = 381/388 (98%), Gaps = 5/388 (1%) Strand = Plus / Plus Query: 47 tctctccagagaaaactactgcaatcattcggtgaagatctttcagagatagacgccaaa 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 955 tctctccagagaaaactactgcaatcattcggtgaagatctttcagagatagacgccaaa 1014 Query: 107 ctagaattgcttaactgtcatcccttaatttttgaaatatagatcacctcaacgattatc 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1015 ctagaattgcttaactgtcatcccttaatttttgaaatatagatcacctcaacgattatc 1074 Query: 167 aaatcttatatccaatataagatattagcatatgctagataagaatatatattaccatcc 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1075 aaatcttatatccaatataagatattagcatatgctagataagaatatatattaccatcc 1134 Query: 227 tgcattttaatccattacatgacgtccggagatacgtagatccatgtataaggaatagcc 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1135 tgcattttaatccattacatgacgtccggagatacgtagatccatgtataaggaatagcc 1194 Query: 287 tcatatgtgatggctctatcaggttatagtgcacatctaattgtcatattaacaacaaca 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1195 tcatatgtgatggctctatcaggttatagtgcacatctaattgtcatattaacaacaaca 1254 Query: 347 tgactccgt-ggccaagct-ggttaaggcgtg-cg-actgttaatcgcaagatcgag-ag 401 ||||||||| ||||||||| ||||| |||||| || ||||||||||||||||||||| || Sbjct: 1255 tgactccgtgggccaagctgggttagggcgtgacgcactgttaatcgcaagatcgagaag 1314 Query: 402 ttcaatcctctccggggtcgtttatttt 429 ||||||||||||||||||||||| |||| Sbjct: 1315 ttcaatcctctccggggtcgtttttttt 1342 >3x_Contig1446 Length = 10598 Score = 168 bits (85), Expect = 1e-41 Identities = 88/89 (98%) Strand = Plus / Minus Query: 343 aacatgactccgtggccaagctggttaaggcgtgcgactgttaatcgcaagatcgagagt 402 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2545 aacacgactccgtggccaagctggttaaggcgtgcgactgttaatcgcaagatcgagagt 2486 Query: 403 tcaatcctctccggggtcgtttatttttt 431 ||||||||||||||||||||||||||||| Sbjct: 2485 tcaatcctctccggggtcgtttatttttt 2457 >3x_Contig1396 Length = 8488 Score = 159 bits (80), Expect = 1e-38 Identities = 83/84 (98%) Strand = Plus / Plus Query: 348 gactccgtggccaagctggttaaggcgtgcgactgttaatcgcaagatcgagagttcaat 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7779 gactccgtggccaagctggttaaggcgtgcgactgttaatcgcaagatcgagagttcaat 7838 Query: 408 cctctccggggtcgtttatttttt 431 ||||||||||||||||| |||||| Sbjct: 7839 cctctccggggtcgtttttttttt 7862 >3x_Contig631 Length = 2339 Score = 159 bits (80), Expect = 1e-38 Identities = 83/84 (98%) Strand = Plus / Plus Query: 348 gactccgtggccaagctggttaaggcgtgcgactgttaatcgcaagatcgagagttcaat 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1451 gactccgtggccaagctggttaaggcgtgcgactgttaatcgcaagatcgagagttcaat 1510 Query: 408 cctctccggggtcgtttatttttt 431 |||||||||||||||||| ||||| Sbjct: 1511 cctctccggggtcgtttaattttt 1534 >3x_Contig904 Length = 3319 Score = 155 bits (78), Expect = 2e-37 Identities = 78/78 (100%) Strand = Plus / Minus Query: 347 tgactccgtggccaagctggttaaggcgtgcgactgttaatcgcaagatcgagagttcaa 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1710 tgactccgtggccaagctggttaaggcgtgcgactgttaatcgcaagatcgagagttcaa 1651 Query: 407 tcctctccggggtcgttt 424 |||||||||||||||||| Sbjct: 1650 tcctctccggggtcgttt 1633 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 13,611 Number of Sequences: 1807 Number of extensions: 13611 Number of successful extensions: 165 Number of sequences better than 1.0e-20: 5 length of query: 949 length of database: 10,358,551 effective HSP length: 16 effective length of query: 933 effective length of database: 10,329,639 effective search space: 9637553187 effective search space used: 9637553187 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)