BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC35ZF06FM1.SCF screened BAC_end (955 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1222 1479 0.0 >3x_Contig1222 Length = 5224 Score = 1479 bits (746), Expect = 0.0 Identities = 844/866 (97%), Gaps = 8/866 (0%) Strand = Plus / Plus Query: 88 cgctttataattgttctaaaatgtgaaccaaccttactccatgctaacagactctctaga 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3643 cgctttataattgttctaaaatgtgaaccaaccttactccatgctaacagactctctaga 3702 Query: 148 ctgtctagtccgctagttactacacgatcaataatttcgatcggaagactcattactttt 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3703 ctgtctagtccgctagttactacacgatcaataatttcgatcggaagactcattactttt 3762 Query: 208 gtacccttaaatcttcttctcctccttcttatcattagcaaatctgtcaaaagtgtcaac 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3763 gtacccttaaatcttcttctcctccttcttatcattagcaaatctgtcaaaagtgtcaac 3822 Query: 268 taatgcagcttatcttgcacgttgtaaactaggtccttataattcaactgatttcaagta 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3823 taatgcagcttatcttgcacgttgtaaactaggtccttataattcaactgatttcaagta 3882 Query: 328 cgctggtatatccaagatgcctttagacttcttccagtgtttgggtcagttgagcaatct 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3883 cgctggtatatccaagatgcctttagacttcttccagtgtttgggtcagttgagcaatct 3942 Query: 388 gttccgtaatctgtcgctttattctttaatatgctgactcaacctcaaagaacgttcgga 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3943 gttccgtaatctgtcgctttattctttaatatgctgactcaacctcaaagaacgttcgga 4002 Query: 448 atacattttgacacttaaagtaccgataaaattgtggattttgttgcctataattgtaag 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4003 atacattttgacacttaaagtaccgataaaattgtggattttgttgcctataattgtaag 4062 Query: 508 caatgaaatatgtttgatattccacctactggaccgtaccaacctacagattgcagcagt 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4063 caatgaaatatgtttgatattccacctactggaccgtaccaacctacagattgcagcagt 4122 Query: 568 atctcgtccaataacaacttccctgtctcagtttggcctcttaatccttcttactgacat 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4123 atctcgtccaataacaacttccctgtctcagtttggcctcttaatccttcttactgacat 4182 Query: 628 tatatctcattacccggacataacatgtcaaaatgatactcaaggcatcaacattaagtt 687 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 4183 tatatctcattacccggacataacatgtcaaaatgatactcaaggcatcaacattaag-t 4241 Query: 688 tcatttaaacagtacatgcaaataattgaagaatgaaggataaaggaagatgaagatgag 747 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 4242 tcatttaaacagtacatgcaaataattgaagaatgaaggataaaggaagaagaagaagag 4301 Query: 748 attgccggcactgatgacaccttttcctttcccatt-caaccagtggattctcattgttt 806 |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 4302 attgccggcactgaggacaccttttcctttcccattccaaccagtggattctcattgttt 4361 Query: 807 tt-aaatatagaagt-actgtgctcttaagatgacatacaccatcgaaacatgtagggat 864 || |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 4362 ttcaaatatagaagtaactgtgctctcaagatgacatacaccatcgaaacatgtagggat 4421 Query: 865 gataattaatcgg-ttgagggaa-cattgttcgatttcac-atgttataattttattgga 921 || || || ||| ||||||||| |||||| ||||| || |||| ||| | |||||||| Sbjct: 4422 gagaa-gaagcggtttgagggaaccattgtacgattcaacaatgtaatagtattattgga 4480 Query: 922 cccaggatggaacggtgaaagcagtt 947 ||||||||||||||||||| |||||| Sbjct: 4481 cccaggatggaacggtgaaggcagtt 4506 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6858 Number of Sequences: 1807 Number of extensions: 6858 Number of successful extensions: 81 Number of sequences better than 1.0e-20: 1 length of query: 955 length of database: 10,358,551 effective HSP length: 16 effective length of query: 939 effective length of database: 10,329,639 effective search space: 9699531021 effective search space used: 9699531021 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)