BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC35ZG03FM1.SCF screened BAC_end
         (952 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1502                                                        1534   0.0  

>3x_Contig1502 
          Length = 14970

 Score = 1534 bits (774), Expect = 0.0
 Identities = 845/866 (97%), Gaps = 2/866 (0%)
 Strand = Plus / Minus

                                                                        
Query: 86   tccggtattttgcgatctgttgaaacttgaacataagcattagccaaaagcatatcgaag 145
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1915 tccggtattttgcgatctgttgaaacttgaacataagcattagccaaaagcatatcgaag 1856

                                                                        
Query: 146  tacctaccccatctctttctaagtaaaaaacttggaacggcgacagattcgtcatcttcc 205
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1855 tacctaccccatctctttctaagtaaaaaacttggaacggcgacagattcgtcatcttcc 1796

                                                                        
Query: 206  gttatgaactcaaaatctgctagtagcttgttgtagacttccaaagaatctttacctaaa 265
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1795 gttatgaactcaaaatctgctagtagcttgttgtagacttccaaagaatctttacctaaa 1736

                                                                        
Query: 266  accattgaataagatgggaagacggatcttatagatgtgatttcagatggtggggcaaca 325
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1735 accattgaataagatgggaagacggatcttatagatgtgatttcagatggtggggcaaca 1676

                                                                        
Query: 326  tatctactgtaattttcgaactggtctgtctctgtttgagccaaactgcccggtattttc 385
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1675 tatctactgtaattttcgaactggtctgtctctgtttgagccaaactgcccggtattttc 1616

                                                                        
Query: 386  tttgcagaggatgatttagaggatttctgatctctctgagcagaatggaataaattagtg 445
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1615 tttgcagaggatgatttagaggatttctgatctctctgagcagaatggaataaattagtg 1556

                                                                        
Query: 446  atatgcaacccgaaggaaagcagtctatcaaatttttgtacagagggcaaacagccagaa 505
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1555 atatgcaacccgaaggaaagcagtctatcaaatttttgtacagagggcaaacagccagaa 1496

                                                                        
Query: 506  tcatttttggtaccaagaagcaaagccttgtgatgcgattcccataagaacaatttccag 565
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1495 tcatttttggtaccaagaagcaaagccttgtgatgcgattcccataagaacaatttccag 1436

                                                                        
Query: 566  aatctatgttttgagctatgtatatcatcgcagttgatactcaatctagtccatttccct 625
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1435 aatctatgttttgagctatgtatatcatcgcagttgatactcaatctagtccatttccct 1376

                                                                        
Query: 626  gaagtgatgttgtaaaggaaacaatgaaaattgtctgactgtaagtttggatggaaacca 685
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1375 gaagtgatgttgtaaaggaaacaatgaaaattgtctgactgtaagtttggatggaaacca 1316

                                                                        
Query: 686  gatattatgatgttataaccgaatttatcgccggtgggccattgcaaattataggcgata 745
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1315 gatattatgatgttataaccgaatttatcgccggtgggccattgcaaattataggcgata 1256

                                                                        
Query: 746  tgtaatcntttttcttcgtctatcgttggcatcatagacgtgcattctagcaccttcggc 805
            ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1255 tgtaatc-tttttcttcgtctatcgttgtcatcatagacgtgcattctagcaccttcggc 1197

                                                                        
Query: 806  atccggcattaaaagtaagggcgaaagtggattctctttcgagttgaaattgcacttaac 865
            ||||||||||||| ||||||   |||||||||||||||  ||||||||||||||||||| 
Sbjct: 1196 atccggcattaaaggtaaggcgaaaagtggattctcttcggagttgaaattgcacttaaa 1137

                                                                        
Query: 866  ctcatgatcatgatcatgatattccttttttgagggag-atatcccggccacgacggcag 924
            ||||||||||||||||||| |||||| | ||||||||| |||  | | | ||||||||||
Sbjct: 1136 ctcatgatcatgatcatgagattcctctattgagggagaatacacagccaacgacggcag 1077

                                      
Query: 925  tttaccctctttttcttcacccaaca 950
            |||| |||| ||||||||| ||||||
Sbjct: 1076 tttagcctcattttcttcaaccaaca 1051


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6389
Number of Sequences: 1807
Number of extensions: 6389
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 1
length of query: 952
length of database: 10,358,551
effective HSP length: 16
effective length of query: 936
effective length of database: 10,329,639
effective search space: 9668542104
effective search space used: 9668542104
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)