BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC35ZG03FM1.SCF screened BAC_end (952 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1502 1534 0.0 >3x_Contig1502 Length = 14970 Score = 1534 bits (774), Expect = 0.0 Identities = 845/866 (97%), Gaps = 2/866 (0%) Strand = Plus / Minus Query: 86 tccggtattttgcgatctgttgaaacttgaacataagcattagccaaaagcatatcgaag 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1915 tccggtattttgcgatctgttgaaacttgaacataagcattagccaaaagcatatcgaag 1856 Query: 146 tacctaccccatctctttctaagtaaaaaacttggaacggcgacagattcgtcatcttcc 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1855 tacctaccccatctctttctaagtaaaaaacttggaacggcgacagattcgtcatcttcc 1796 Query: 206 gttatgaactcaaaatctgctagtagcttgttgtagacttccaaagaatctttacctaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1795 gttatgaactcaaaatctgctagtagcttgttgtagacttccaaagaatctttacctaaa 1736 Query: 266 accattgaataagatgggaagacggatcttatagatgtgatttcagatggtggggcaaca 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1735 accattgaataagatgggaagacggatcttatagatgtgatttcagatggtggggcaaca 1676 Query: 326 tatctactgtaattttcgaactggtctgtctctgtttgagccaaactgcccggtattttc 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1675 tatctactgtaattttcgaactggtctgtctctgtttgagccaaactgcccggtattttc 1616 Query: 386 tttgcagaggatgatttagaggatttctgatctctctgagcagaatggaataaattagtg 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1615 tttgcagaggatgatttagaggatttctgatctctctgagcagaatggaataaattagtg 1556 Query: 446 atatgcaacccgaaggaaagcagtctatcaaatttttgtacagagggcaaacagccagaa 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1555 atatgcaacccgaaggaaagcagtctatcaaatttttgtacagagggcaaacagccagaa 1496 Query: 506 tcatttttggtaccaagaagcaaagccttgtgatgcgattcccataagaacaatttccag 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1495 tcatttttggtaccaagaagcaaagccttgtgatgcgattcccataagaacaatttccag 1436 Query: 566 aatctatgttttgagctatgtatatcatcgcagttgatactcaatctagtccatttccct 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1435 aatctatgttttgagctatgtatatcatcgcagttgatactcaatctagtccatttccct 1376 Query: 626 gaagtgatgttgtaaaggaaacaatgaaaattgtctgactgtaagtttggatggaaacca 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1375 gaagtgatgttgtaaaggaaacaatgaaaattgtctgactgtaagtttggatggaaacca 1316 Query: 686 gatattatgatgttataaccgaatttatcgccggtgggccattgcaaattataggcgata 745 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1315 gatattatgatgttataaccgaatttatcgccggtgggccattgcaaattataggcgata 1256 Query: 746 tgtaatcntttttcttcgtctatcgttggcatcatagacgtgcattctagcaccttcggc 805 ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1255 tgtaatc-tttttcttcgtctatcgttgtcatcatagacgtgcattctagcaccttcggc 1197 Query: 806 atccggcattaaaagtaagggcgaaagtggattctctttcgagttgaaattgcacttaac 865 ||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||| Sbjct: 1196 atccggcattaaaggtaaggcgaaaagtggattctcttcggagttgaaattgcacttaaa 1137 Query: 866 ctcatgatcatgatcatgatattccttttttgagggag-atatcccggccacgacggcag 924 ||||||||||||||||||| |||||| | ||||||||| ||| | | | |||||||||| Sbjct: 1136 ctcatgatcatgatcatgagattcctctattgagggagaatacacagccaacgacggcag 1077 Query: 925 tttaccctctttttcttcacccaaca 950 |||| |||| ||||||||| |||||| Sbjct: 1076 tttagcctcattttcttcaaccaaca 1051 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6389 Number of Sequences: 1807 Number of extensions: 6389 Number of successful extensions: 50 Number of sequences better than 1.0e-20: 1 length of query: 952 length of database: 10,358,551 effective HSP length: 16 effective length of query: 936 effective length of database: 10,329,639 effective search space: 9668542104 effective search space used: 9668542104 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)