BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC35ZG05FM1.SCF screened BAC_end (927 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig655 1281 0.0 >3x_Contig655 Length = 2459 Score = 1281 bits (646), Expect = 0.0 Identities = 649/650 (99%) Strand = Plus / Minus Query: 87 ctggaccaaatggtgcagctggaatgaacacattaatgacacattatctagaagttgaaa 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 654 ctggaccaaatggtgcagctggaatgaacacattaatgacacattatctagaagttgaaa 595 Query: 147 aagatagccattccgctgtggatttatattcttggagaaagaagtggcaaatacctccca 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 594 aagatagccattccgctgtggatttatattcttggagaaagaagtggcaaatacctccca 535 Query: 207 atgaatacactgaaacaaatttgttcaaagggttggcaaggttgccagaaccaatttctg 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 534 atgaatacactgaaacaaatttgttcaaagggttggcaaggttgccagaaccaatttctg 475 Query: 267 tcaaagttgcagaacgagtggtgaagatagttttaaaattggttgaagatgaaagactca 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 474 tcaaagttgcagaacgagtggtgaagatagttttaaaattggttgaagatgaaagactca 415 Query: 327 ataatataaattttaacgctgcattaagtgcgttggcgaactctaacgaccctagttacc 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 414 ataatataaattttaacgctgcattaagtgcgttggcgaactctaacgaccctagttacc 355 Query: 387 tgttcaaatgttttgatttgagacccaaaggtataaaaaaagatgcaattgcgtacacgc 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 354 tgttcaaatgttttgatttgagacccaaaggtataaaaaaagatgcaattgcgtacacgc 295 Query: 447 aactacttattggatgtgcgaagattacagatgcagtggaagccattcaaagggctgatg 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 294 aactacttattggatgtgcgaagattacagatgcagtggaagccattcaaagggctgatg 235 Query: 507 atataatgaactctgctgaccccaaagttatcgattcacaaatgttttttcattatttga 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 234 atataatgaactctgctgaccccaaagttatcgattcacaaatgttttttcattatttga 175 Query: 567 acgtttggcactctagaagggatctacgattttccaattgtgtgttgcctctgcttgata 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 174 acgtttggcactctagaagggatctacgattttccaattgtgtgttgcctctgcttgata 115 Query: 627 tattctatgattttaaggtcccaaatgttcgtttcaagatagaaataccagaatttgtca 686 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 114 tattctatgattttaaggtcccaaatgttcgtttcaagaaagaaataccagaatttgtca 55 Query: 687 agttgcctgctttgaagaattggaatatcaaatctaaaatgcgtttgact 736 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 54 agttgcctgctttgaagaattggaatatcaaatctaaaatgcgtttgact 5 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7343 Number of Sequences: 1807 Number of extensions: 7343 Number of successful extensions: 48 Number of sequences better than 1.0e-20: 1 length of query: 927 length of database: 10,358,551 effective HSP length: 16 effective length of query: 911 effective length of database: 10,329,639 effective search space: 9410301129 effective search space used: 9410301129 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)