BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC35ZG06FM1.SCF screened BAC_end (945 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1766 1392 0.0 >3x_Contig1766 Length = 23951 Score = 1392 bits (702), Expect = 0.0 Identities = 816/849 (96%), Gaps = 4/849 (0%) Strand = Plus / Plus Query: 86 tatcactatctttgtcgttttttgcgtttcccttacgccaaatcatcatcttaaagagaa 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16494 tatcactatctttgtcgttttttgcgtttcccttacgccaaatcatcatcttaaagagaa 16553 Query: 146 accgttggtggctttgatatactacacatctttttactgatctgcagcatatatgagtga 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16554 accgttggtggctttgatatactacacatctttttactgatctgcagcatatatgagtga 16613 Query: 206 caatccgtttgagtcttatctcgcacgataccagcaaccgccacagcccgctgtcgatgt 265 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 16614 caatccgtttgagtcttatctcgcacgagaccagcaaccgccacagcccgctgtcgatgt 16673 Query: 266 gctttcgcagcctaatgcctcactagaatattgcacggtgtcagtggaagatacgatagc 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16674 gctttcgcagcctaatgcctcactagaatattgcacggtgtcagtggaagatacgatagc 16733 Query: 326 acaattaggaactgatttcgataatggtttatccaatccatcagaaattgcttataggaa 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16734 acaattaggaactgatttcgataatggtttatccaatccatcagaaattgcttataggaa 16793 Query: 386 atcaatttggggatcaaacgaagtcctacctgatgagaaagtatctctttggaaaaaatt 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16794 atcaatttggggatcaaacgaagtcctacctgatgagaaagtatctctttggaaaaaatt 16853 Query: 446 cttgtctacattcattgaagaccctttaattcttttgttgatcggatctgcagttatatc 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16854 cttgtctacattcattgaagaccctttaattcttttgttgatcggatctgcagttatatc 16913 Query: 506 tttcttaatgggaaacatcgatgattccatcagtattgctctggccatcatcattgttgt 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16914 tttcttaatgggaaacatcgatgattccatcagtattgctctggccatcatcattgttgt 16973 Query: 566 taccgtcgggtttgtacaagattataagtcagagaagtcattagatgcattaaacaagtt 625 ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 16974 taccgtcgggtttgtacaagaatataagtcagagaagtcattagaagcattaaacaagtt 17033 Query: 626 agtcccagcggaatgtcatttgacaagatcatggcagttatcccatgttcttgcgtcaaa 685 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 17034 agtcccagcggaatgtcatttgacaagatcagggcagttatcccatgttcttgcgtcaaa 17093 Query: 686 cttagtttccagtgatttggtcagattttaagtcggtgatagaattcctgctgatttaag 745 ||||||| | ||||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct: 17094 cttagttccaggtgatttggtcagatttaaggtcggtgatagaattcctgctgatttaag 17153 Query: 746 -attgtagaatctatcgatttgtgcgtagatgaaaggtatttgacaggtgaaaatg-atc 803 ||||||||||||||||||||||||||||||||||| |||||||||||||||||| | | Sbjct: 17154 aattgtagaatctatcgatttgtgcgtagatgaaagtaatttgacaggtgaaaatgaacc 17213 Query: 804 agtacccaagatttctggtgcatgggaccctaag-actactctcatatacctggattcan 862 ||||| ||||| |||||||||| |||||||||| ||||||||||||||||||||| || Sbjct: 17214 agtacacaagagttctggtgcagtggaccctaagaactactctcatatacctggatccat 17273 Query: 863 atttccagttggcgataggaactggttcgggattatgggtatccttggtcagaaaagccc 922 |||||||||||||||| ||||| |||| ||||||||| | ||||||||| ||| || Sbjct: 17274 tattccagttggcgatagaaactgtatcggatttatgggta-ctttggtcagagaaggcc 17332 Query: 923 atgttaagg 931 ||| ||||| Sbjct: 17333 atggtaagg 17341 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5710 Number of Sequences: 1807 Number of extensions: 5710 Number of successful extensions: 24 Number of sequences better than 1.0e-20: 1 length of query: 945 length of database: 10,358,551 effective HSP length: 16 effective length of query: 929 effective length of database: 10,329,639 effective search space: 9596234631 effective search space used: 9596234631 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)