BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC35ZG07FM1.SCF screened BAC_end
         (933 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1565                                                        1294   0.0  

>3x_Contig1565 
          Length = 10922

 Score = 1294 bits (653), Expect = 0.0
 Identities = 793/825 (96%), Gaps = 11/825 (1%)
 Strand = Plus / Minus

                                                                        
Query: 88   ccattaattcctatttcgtacgatctaaggaaggaaataattgaacgttcttcagtagtt 147
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5657 ccattaattcctatttcgtacgatctaaggaaggaaataattgaacgttcttcagtagtt 5598

                                                                        
Query: 148  ctttggctcaaattggctttctattcacatgtgctgatgcatcactcgcatcagtgactt 207
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5597 ctttggctcaaattggctttctattcacatgtgctgatgcatcactcgcatcagtgactt 5538

                                                                        
Query: 208  tttccctcctcctcctcaatttgagcaggttctcgaggaaccttaaaacgcctgtatata 267
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5537 tttccctcctcctcctcaatttgagcaggttctcgaggaaccttaaaacgcctgtatata 5478

                                                                        
Query: 268  atccattaccggaaattaattcctaaagtgaaaaaagaaaataaaaaagtcaaaaccgct 327
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5477 atccattaccggaaattaattcctaaagtgaaaaaagaaaataaaaaagtcaaaaccgct 5418

                                                                        
Query: 328  cactgattcgcgacccagaagccgacatatctgttgaaaaccgaccctgtcctcagagta 387
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5417 cactgattcgcgacccagaagccgacatatctgttgaaaaccgaccctgtcctcagagta 5358

                                                                        
Query: 388  taagcaggtacgacctgtataaactctaagttaagcgtatactctacatctcatactttc 447
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5357 taagcaggtacgacctgtataaactctaagttaagcgtatactctacatctcatactttc 5298

                                                                        
Query: 448  ggttaacgatcccgattaaataacaacagtcagacagaaagcttgctttggtctccaatc 507
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5297 ggttaacgatcccgattaaataacaacagtcagacagaaagcttgctttggtctccaatc 5238

                                                                        
Query: 508  ccattttggccattgctaattggaaagagtagacgtagatcatccattgttgcgatcggg 567
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5237 ccattttggccattgctaattggaaagagtagacgtagatcatccattgttgcgatcggg 5178

                                                                        
Query: 568  atggaatgtcaacattctatgtgcgctt-agggatactgtgatcgacagtaacgtagagt 626
            |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 5177 atggaatgtcaacattctatgtgcgcttaaggaatactgtgatcgacagtaacgtagagt 5118

                                                                        
Query: 627  aaatgcagccagatgtagcaactaatgattcaagttgttttcccacccccgagtcttaaa 686
            ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 5117 aaatgcagccagatgtagcaactaatgattcaagttgttttccca-ccccgagtcttaaa 5059

                                                                        
Query: 687  tgaaggctttgcagggaccaaatgtttgcaggaaagaaaaagcctggaaaagaaatttgc 746
            || |||||||||||||||| |||| |||||||||  ||||||||||| ||||||||||||
Sbjct: 5058 tg-aggctttgcagggacc-aatggttgcaggaagaaaaaagcctgg-aaagaaatttgc 5002

                                                                        
Query: 747  aagcaagttttctttattcggtccattgtttgctacacttttcattaaaatccaagtggg 806
            ||||||| |||||||| ||||||||||| ||||||||| |||||| ||| | ||||||||
Sbjct: 5001 aagcaag-tttcttta-tcggtccattg-ttgctacacgtttcatcaaagt-caagtggg 4946

                                                                        
Query: 807  gtccacgatcatccagaaaacccattcggaatctctgatattcaatcaattcttttccga 866
            ||||| ||||| |||||||||| ||  | ||||||||||| || |||||||||||| || 
Sbjct: 4945 gtccaggatcaaccagaaaaccaatcagtaatctctgata-tccatcaattctttt-cgt 4888

                                                         
Query: 867  atttttcttccctacggattccttaacgattttttttaagttttt 911
            | |||||||| |||| |||| |||| |||||||||| ||||||||
Sbjct: 4887 agttttcttctctactgatttcttagcgatttttttcaagttttt 4843


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7450
Number of Sequences: 1807
Number of extensions: 7450
Number of successful extensions: 58
Number of sequences better than 1.0e-20: 1
length of query: 933
length of database: 10,358,551
effective HSP length: 16
effective length of query: 917
effective length of database: 10,329,639
effective search space: 9472278963
effective search space used: 9472278963
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)