BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC35ZG07FM1.SCF screened BAC_end (933 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1565 1294 0.0 >3x_Contig1565 Length = 10922 Score = 1294 bits (653), Expect = 0.0 Identities = 793/825 (96%), Gaps = 11/825 (1%) Strand = Plus / Minus Query: 88 ccattaattcctatttcgtacgatctaaggaaggaaataattgaacgttcttcagtagtt 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5657 ccattaattcctatttcgtacgatctaaggaaggaaataattgaacgttcttcagtagtt 5598 Query: 148 ctttggctcaaattggctttctattcacatgtgctgatgcatcactcgcatcagtgactt 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5597 ctttggctcaaattggctttctattcacatgtgctgatgcatcactcgcatcagtgactt 5538 Query: 208 tttccctcctcctcctcaatttgagcaggttctcgaggaaccttaaaacgcctgtatata 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5537 tttccctcctcctcctcaatttgagcaggttctcgaggaaccttaaaacgcctgtatata 5478 Query: 268 atccattaccggaaattaattcctaaagtgaaaaaagaaaataaaaaagtcaaaaccgct 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5477 atccattaccggaaattaattcctaaagtgaaaaaagaaaataaaaaagtcaaaaccgct 5418 Query: 328 cactgattcgcgacccagaagccgacatatctgttgaaaaccgaccctgtcctcagagta 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5417 cactgattcgcgacccagaagccgacatatctgttgaaaaccgaccctgtcctcagagta 5358 Query: 388 taagcaggtacgacctgtataaactctaagttaagcgtatactctacatctcatactttc 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5357 taagcaggtacgacctgtataaactctaagttaagcgtatactctacatctcatactttc 5298 Query: 448 ggttaacgatcccgattaaataacaacagtcagacagaaagcttgctttggtctccaatc 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5297 ggttaacgatcccgattaaataacaacagtcagacagaaagcttgctttggtctccaatc 5238 Query: 508 ccattttggccattgctaattggaaagagtagacgtagatcatccattgttgcgatcggg 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5237 ccattttggccattgctaattggaaagagtagacgtagatcatccattgttgcgatcggg 5178 Query: 568 atggaatgtcaacattctatgtgcgctt-agggatactgtgatcgacagtaacgtagagt 626 |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 5177 atggaatgtcaacattctatgtgcgcttaaggaatactgtgatcgacagtaacgtagagt 5118 Query: 627 aaatgcagccagatgtagcaactaatgattcaagttgttttcccacccccgagtcttaaa 686 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 5117 aaatgcagccagatgtagcaactaatgattcaagttgttttccca-ccccgagtcttaaa 5059 Query: 687 tgaaggctttgcagggaccaaatgtttgcaggaaagaaaaagcctggaaaagaaatttgc 746 || |||||||||||||||| |||| ||||||||| ||||||||||| |||||||||||| Sbjct: 5058 tg-aggctttgcagggacc-aatggttgcaggaagaaaaaagcctgg-aaagaaatttgc 5002 Query: 747 aagcaagttttctttattcggtccattgtttgctacacttttcattaaaatccaagtggg 806 ||||||| |||||||| ||||||||||| ||||||||| |||||| ||| | |||||||| Sbjct: 5001 aagcaag-tttcttta-tcggtccattg-ttgctacacgtttcatcaaagt-caagtggg 4946 Query: 807 gtccacgatcatccagaaaacccattcggaatctctgatattcaatcaattcttttccga 866 ||||| ||||| |||||||||| || | ||||||||||| || |||||||||||| || Sbjct: 4945 gtccaggatcaaccagaaaaccaatcagtaatctctgata-tccatcaattctttt-cgt 4888 Query: 867 atttttcttccctacggattccttaacgattttttttaagttttt 911 | |||||||| |||| |||| |||| |||||||||| |||||||| Sbjct: 4887 agttttcttctctactgatttcttagcgatttttttcaagttttt 4843 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7450 Number of Sequences: 1807 Number of extensions: 7450 Number of successful extensions: 58 Number of sequences better than 1.0e-20: 1 length of query: 933 length of database: 10,358,551 effective HSP length: 16 effective length of query: 917 effective length of database: 10,329,639 effective search space: 9472278963 effective search space used: 9472278963 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)