BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC35ZG08FM1.SCF screened BAC_end
         (915 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1251                                                        1455   0.0  

>3x_Contig1251 
          Length = 6331

 Score = 1455 bits (734), Expect = 0.0
 Identities = 783/794 (98%), Gaps = 4/794 (0%)
 Strand = Plus / Plus

                                                                        
Query: 86   ttgtttccatgcttctactttattttactagtgtaagcgatactggcaatgtctctcaat 145
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2257 ttgtttccatgcttctactttattttactagtgtaagcgatactggcaatgtctctcaat 2316

                                                                        
Query: 146  agaaaaatatcatcgatcgtattgaaaggaaaactacgaaagaaatcattaaaggagtag 205
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2317 agaaaaatatcatcgatcgtattgaaaggaaaactacgaaagaaatcattaaaggagtag 2376

                                                                        
Query: 206  aaagggtaaatgtaaatacatcaagcaaactgaagaaaactcattgagcgtggtaactag 265
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2377 aaagggtaaatgtaaatacatcaagcaaactgaagaaaactcattgagcgtggtaactag 2436

                                                                        
Query: 266  ttgtaaatatactgaagatacggaactagaatgtctgtggacgagaaatatgatgctgct 325
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2437 ttgtaaatatactgaagatacggaactagaatgtctgtggacgagaaatatgatgctgct 2496

                                                                        
Query: 326  tgcgagcttttatacagattggatccaacaaaggtgaaaacccatttacagaaccttatt 385
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2497 tgcgagcttttatacagattggatccaacaaaggtgaaaacccatttacagaaccttatt 2556

                                                                        
Query: 386  gcgttggagcctgaaatcgcagaaggattactttcctcaattgatatcccattgaccatt 445
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2557 gcgttggagcctgaaatcgcagaaggattactttcctcaattgatatcccattgaccatt 2616

                                                                        
Query: 446  aagaaggataccgatgctaacaacaaagaattcttatgttgcgactacaaccgtgacatc 505
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2617 aagaaggataccgatgctaacaacaaagaattcttatgttgcgactacaaccgtgacatc 2676

                                                                        
Query: 506  gattctcataggtcaccgtggtctaaccagtacttccctgaattgagtgccgaagatttg 565
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2677 gattctcataggtcaccgtggtctaaccagtacttccctgaattgagtgccgaagatttg 2736

                                                                        
Query: 566  aaagaaagtccttttcccagtgagccattgagagaactagaagttgcatgcaacaattct 625
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2737 aaagaaagtccttttcccagtgagccattgagagaactagaagttgcatgcaacaattct 2796

                                                                        
Query: 626  ttcgagttgtatagggacctatactacgagggtggttacacttcaacgtatctctgggac 685
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2797 ttcgagttgtatagggacctatactacgagggtggttacacttcaacgtatctctgggac 2856

                                                                        
Query: 686  gttgatgaatcaactgatttcgcgggagtcattcttttcaag-aagctgaatcagatgat 744
            |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 2857 gttgatgaatcaactgatttcgcgggagtcattcttttcaagaaagctgaatcagatgat 2916

                                                                        
Query: 745  tctaaatgggacagtatccacgtcatatttgcca-ccacgatgaagagggtattgaagtc 803
            |||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||
Sbjct: 2917 tctaaatgggacagtatccacgtcatatctgccacccacgatgaagagggtatggaagtc 2976

                                                                        
Query: 804  acatttaatgtcactacaacgtggatcctgcacttggaaaacctatcaatag-acaacaa 862
            |||| ||||||||||||||||  |||| ||||||||||||||||||||| || |||||||
Sbjct: 2977 acatataatgtcactacaacggtgatcttgcacttggaaaacctatcaaaagaacaacaa 3036

                          
Query: 863  ct-tcattgtccgg 875
            || |||||||||||
Sbjct: 3037 ctatcattgtccgg 3050


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6640
Number of Sequences: 1807
Number of extensions: 6640
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 915
length of database: 10,358,551
effective HSP length: 16
effective length of query: 899
effective length of database: 10,329,639
effective search space: 9286345461
effective search space used: 9286345461
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)