BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC35ZG10RM1.SCF screened BAC_end (885 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig185 969 0.0 >3x_Contig185 Length = 1072 Score = 969 bits (489), Expect = 0.0 Identities = 505/508 (99%), Gaps = 2/508 (0%) Strand = Plus / Plus Query: 45 cttgtaagcaaagcgagaatctttcactggattacagagatatgatggggaaacatactc 104 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93 cttgtaagcaaagcgagaatctttcactggattacagagatatgatggggaaacatactc 152 Query: 105 cgtgcgggctgcaaagagtgaatagggtaaaaaaaaagaactcaattcaacggagttgag 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 153 cgtgcgggctgcaaagagtgaatagggtaaaaaaaaagaactcaattcaacggagttgag 212 Query: 165 ttcgaactttaaaaatttgaccattagcccctgtgatccaatagcatgtagcgtgtaaac 224 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 213 ttcgaactttaaaaatttgaccattagcccctgtgatccaatagcatgtagcgtgtaaac 272 Query: 225 tccgtaggataatggtctaatggttttcgacccggtcattccagtgtggatcttttacaa 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 273 tccgtaggataatggtctaatggttttcgacccggtcattccagtgtggatcttttacaa 332 Query: 285 aacagcagttgtttccagggatgttgagttacgttgtatctttcgataatatccctataa 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 333 aacagcagttgtttccagggatgttgagttacgttgtatctttcgataatatccctataa 392 Query: 345 ttctcggtatgtatttcattttttttttgatcattcatttttttccttcattgtttacgt 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 393 ttctcggtatgtatttcattttttttttgatcattcatttttttccttcattgtttacgt 452 Query: 405 tattttgactgaggaaaacaactggctcanaaatgagtgacaagatcattcaaattcgtt 464 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 453 tattttgactgaggaaaacaactggctcaaaaatgagtgacaagatcattcaaattcgtt 512 Query: 465 agtagtggtgataggtttcagtttattgttttg-aaaaaagagacttgtttcaattgaat 523 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 513 agtagtggtgataggtttcagtttattgttttgtaaaaaagagacttgtttcaattgaat 572 Query: 524 at-aaagggggcctgtaatttctttaaa 550 || ||||||||||||||||||||||||| Sbjct: 573 ataaaagggggcctgtaatttctttaaa 600 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 16,879 Number of Sequences: 1807 Number of extensions: 16879 Number of successful extensions: 151 Number of sequences better than 1.0e-20: 1 length of query: 885 length of database: 10,358,551 effective HSP length: 16 effective length of query: 869 effective length of database: 10,329,639 effective search space: 8976456291 effective search space used: 8976456291 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)