BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC35ZH01RM1.SCF screened BAC_end (930 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1762 1289 0.0 >3x_Contig1762 Length = 22098 Score = 1289 bits (650), Expect = 0.0 Identities = 698/710 (98%), Gaps = 3/710 (0%) Strand = Plus / Plus Query: 47 aggtctaacccatgtcggtaggttcaaagagttgacttggccccaaagacgcgaaatggc 106 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12579 aggtctaacccatgtcggtaggttcaaagagttgacttggccccaaagacgcgaaatggc 12638 Query: 107 gtttaatggcaacgtactgtaacagaaaaacagccagttattattgaatattttaatacg 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12639 gtttaatggcaacgtactgtaacagaaaaacagccagttattattgaatattttaatacg 12698 Query: 167 atacttccccttcactttatcctgcgaatctccttccaccacatttccagattccgctac 226 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 12699 atacttccccttcactttatcctgcgaatctccttccaccacatcgccagattccgctac 12758 Query: 227 ttttatcctttggtaatgctgatttatcaagtacgaactaatgattaacgtaaaactagt 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12759 ttttatcctttggtaatgctgatttatcaagtacgaactaatgattaacgtaaaactagt 12818 Query: 287 cgcgacaacccacttcaccatgcgttttttcgaattctccggtctcacaatgggacccga 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12819 cgcgacaacccacttcaccatgcgttttttcgaattctccggtctcacaatgggacccga 12878 Query: 347 tgacataaacctctggctaagcaacatcttcgtcttatttttcaaataaggacctgacac 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12879 tgacataaacctctggctaagcaacatcttcgtcttatttttcaaataaggacctgacac 12938 Query: 407 acgttgtggaacctgtggccacggaatccgcgacattgtcaacgatacgttcctagatat 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12939 acgttgtggaacctgtggccacggaatccgcgacattgtcaacgatacgttcctagatat 12998 Query: 467 tccaatcattgcgagtatctaaccaccgacacaaaaattcaaaaagaaaacagtcaaata 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12999 tccaatcattgcgagtatctaaccaccgacacaaaaattcaaaaagaaaacagtcaaata 13058 Query: 527 attaccttttaccttgtaatcaccaaaaaacacaacacataacacataacactaaccaac 586 ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| Sbjct: 13059 attaccttttaccttgtaatcaccaaaaaacacaacacaaaacacaaaacactaaccaac 13118 Query: 587 agccttatgaaaaccaactactaatacactgcaaactcttttctatcttcta-taccacg 645 ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 13119 agccttaggaaaaccaactactaatacactgcaaactcttttctatcttctagtaccacg 13178 Query: 646 ctaaggacaattttggcgcgctgctccaaattatctctctagaaaatccatgtgccgatc 705 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13179 ctaaggacaattttggcgcgctgctccaaattatctctctagaaaatccatgtgccgatc 13238 Query: 706 cttaatacattcttttattcaggaaaacctcttattctaaaagctttttt 755 | ||||||||| | ||| ||||||||||||||||||| ||||||||||| Sbjct: 13239 ttaaatacattc-tctatacaggaaaacctcttattct-aaagctttttt 13286 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6770 Number of Sequences: 1807 Number of extensions: 6770 Number of successful extensions: 40 Number of sequences better than 1.0e-20: 1 length of query: 930 length of database: 10,358,551 effective HSP length: 16 effective length of query: 914 effective length of database: 10,329,639 effective search space: 9441290046 effective search space used: 9441290046 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)