BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC35ZH05FM1.SCF screened BAC_end (957 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1682 1080 0.0 >3x_Contig1682 Length = 16889 Score = 1080 bits (545), Expect = 0.0 Identities = 629/649 (96%), Gaps = 6/649 (0%) Strand = Plus / Plus Query: 87 taagacacaacacccatttctttattgaattcttcgctatggatcttttgacccataacg 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14798 taagacacaacacccatttctttattgaattcttcgctatggatcttttgacccataacg 14857 Query: 147 gtgaagtcgttggtgttatggcttacaaccaagaagacggtaccatccacagattccgtg 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14858 gtgaagtcgttggtgttatggcttacaaccaagaagacggtaccatccacagattccgtg 14917 Query: 207 ctcacaagaccattatcgctactggtgggtacggtcgtgcctacttctcttgtacatctg 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14918 ctcacaagaccattatcgctactggtgggtacggtcgtgcctacttctcttgtacatctg 14977 Query: 267 ctcatacttgtacaggtgatggttatgctatggtttctcgtgctggtttcccattgcaag 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14978 ctcatacttgtacaggtgatggttatgctatggtttctcgtgctggtttcccattgcaag 15037 Query: 327 atttggaatttattcaattccatccttccggtatctacggttccggttgtttgatcactg 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15038 atttggaatttattcaattccatccttccggtatctacggttccggttgtttgatcactg 15097 Query: 387 aaggtgctcgtggtgagggtggtttcttggttaactctgaaggtgaacgtttcatggaac 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15098 aaggtgctcgtggtgagggtggtttcttggttaactctgaaggtgaacgtttcatggaac 15157 Query: 447 gttatgctccaactgctaaggatttagcttgtagagacgttgtttctcgtgccatcacca 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15158 gttatgctccaactgctaaggatttagcttgtagagacgttgtttctcgtgccatcacca 15217 Query: 507 tggaaatcagagaatgtagaggtgttggtccagataaggatcacatgtttcttgc-attg 565 |||||||||||||| ||||||||||||||||||| |||||||||||| ||||||| |||| Sbjct: 15218 tggaaatcagagaaggtagaggtgttggtccagaaaaggatcacatg-ttcttgcaattg 15276 Query: 566 aaccatttgccaccttctgtgcttcatgaacgtttgccatgtattctctgaaactgcagc 625 ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 15277 aaccatttgccaccttctgtgcttcatgaacgtttgccaggta-tctctgaaactgcagc 15335 Query: 626 catttttcgccggggtcgatgtcactaaagaaccaattcctattttacctactgtccata 685 || |||||||||| |||||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 15336 ca-ttttcgccggtgtcgatgtcactaaggaaccaattcctatcttacctactgtccatt 15394 Query: 686 ttacaatgggtgggtattccacttaattggaacggggaaagctttgact 734 || |||||| ||||||||| ||| |||||||| | ||||||||||| Sbjct: 15395 ataacatgggt-ggtattccaactaagtggaacggtg-aagctttgact 15441 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5713 Number of Sequences: 1807 Number of extensions: 5713 Number of successful extensions: 43 Number of sequences better than 1.0e-20: 1 length of query: 957 length of database: 10,358,551 effective HSP length: 16 effective length of query: 941 effective length of database: 10,329,639 effective search space: 9720190299 effective search space used: 9720190299 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)