BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC35ZH09FM1.SCF screened BAC_end
         (986 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1730                                                        1277   0.0  

>3x_Contig1730 
          Length = 17223

 Score = 1277 bits (644), Expect = 0.0
 Identities = 770/804 (95%), Gaps = 6/804 (0%)
 Strand = Plus / Plus

                                                                        
Query: 91   ttgtgctcgcgagaccctgaatacagagagaacattggttcttgcaacaacgtattcttc 150
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1541 ttgtgctcgcgagaccctgaatacagagagaacattggttcttgcaacaacgtattcttc 1600

                                                                        
Query: 151  cctttccgctgacgtaaaattcccatgtaagcatttattaaccacagtgggttgcaatat 210
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1601 cctttccgctgacgtaaaattcccatgtaagcatttattaaccacagtgggttgcaatat 1660

                                                                        
Query: 211  ctcgtcaaaaacgttcatttattatctatccccgatatttaaacgtttcagattcaggtg 270
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1661 ctcgtcaaaaacgttcatttattatctatccccgatatttaaacgtttcagattcaggtg 1720

                                                                        
Query: 271  tgactgaagagtgctagtatgcccacctacgctcgtctgtttccagtgttcttagtaatg 330
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1721 tgactgaagagtgctagtatgcccacctacgctcgtctgtttccagtgttcttagtaatg 1780

                                                                        
Query: 331  atagttacctatattttgaagaaccggtgaatatttaaaaattcacagaaactgaaagta 390
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1781 atagttacctatattttgaagaaccggtgaatatttaaaaattcacagaaactgaaagta 1840

                                                                        
Query: 391  aatgtttcgatgacatctgcagaccatttgaaaagatgaataactgcatctgcaaaacag 450
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1841 aatgtttcgatgacatctgcagaccatttgaaaagatgaataactgcatctgcaaaacag 1900

                                                                        
Query: 451  atataaacatagtgtactgtctgtgagcagcagctattattcaatctggcctgaaatttc 510
            ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1901 atataaacatagtgtactgtctgtgagcagcagctattagtcaatctggcctgaaatttc 1960

                                                                        
Query: 511  tgtaaccaaaggtttctacggaccgcgagaagaagaacgttttccaacaagttcagatgg 570
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1961 tgtaaccaaaggtttctacggaccgcgagaagaagaacgttttccaacaagttcagatgg 2020

                                                                        
Query: 571  taaagcagttcgtcatagtcataaaattgggatcttcatcactagttgatgaagagacca 630
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2021 taaagcagttcgtcatagtcataaaattgggatcttcatcactagttgatgaagagacca 2080

                                                                        
Query: 631  aagaaccaaaactttctatcatgtcattgatttgtggagactgtggtaaaagtacgcaga 690
            |||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||
Sbjct: 2081 aagaaccaaaactttctatcatgtcattga-ttgtggagactgtggtaaagttacgcaga 2139

                                                                        
Query: 691  agaagacacaaagttatcattgtatctaatggaagtatcgcccgtcggatttgaaacgat 750
            ||| |||||||||||||||||||||||| |||| |||||| ||||||||||  |||||||
Sbjct: 2140 agaggacacaaagttatcattgtatctagtggaggtatcg-ccgtcggattgaaaacgat 2198

                                                                        
Query: 751  gaatatgaagggaaggcccaagaacttttcaagggtgc-agcaatcgcaacttgtgggcc 809
            |||||||||||||||||| |||||  | || | ||||| |||||||||| | ||||||||
Sbjct: 2199 gaatatgaagggaaggccaaagaaactatccaaggtgcaagcaatcgcagc-tgtgggcc 2257

                                                                        
Query: 810  agggcagattatttgggagggggggattccttggtctttgaaattggatcaaaaaaatgg 869
            | ||||||||| |||||| || ||||||||||| ||| || |||| ||||| | || || 
Sbjct: 2258 aaggcagattaattggga-ggtgggattccttgttctctg-aatttgatcagagaattgc 2315

                                    
Query: 870  ccaaatcctaatacctcgaaatga 893
             |||||||||||  ||||||||||
Sbjct: 2316 tcaaatcctaattactcgaaatga 2339


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7218
Number of Sequences: 1807
Number of extensions: 7218
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 986
length of database: 10,358,551
effective HSP length: 16
effective length of query: 970
effective length of database: 10,329,639
effective search space: 10019749830
effective search space used: 10019749830
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)