BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC36ZA02RM1.SCF screened BAC_end (945 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1650 1231 0.0 >3x_Contig1650 Length = 11257 Score = 1231 bits (621), Expect = 0.0 Identities = 733/765 (95%), Gaps = 4/765 (0%) Strand = Plus / Minus Query: 46 cttcgggccaagtttttgaaacattagttctgagagagatcagctgaataggatcattaa 105 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 9617 cttcgggccaagtttttgaaacag-agttctgagagagatcagctgaataggatcattaa 9559 Query: 106 accgtttggggaggtttctgaaacaactttgaagctgtatgaggatgagaatggtgaaaa 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9558 accgtttggggaggtttctgaaacaactttgaagctgtatgaggatgagaatggtgaaaa 9499 Query: 166 tatgttacagcggttggattcccctcctattgcggaaagttctgtgaaatatggtctgca 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 9498 tatgttacagcggttggattcccctcctattgcggaaagttctgtgaaatatggcaggca 9439 Query: 226 ttcgaagaatcattctattgggactgaatcgaatctgttctctgcttcgcaaaataatac 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9438 ttcgaagaatcattctattgggactgaatcgaatctgttctctgcttcgcaaaataatac 9379 Query: 286 gatggtttccttagtggaagaagaggaagagggaacagatagagtcaggaatggcattgc 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9378 gatggtttccttagtggaagaagaggaagagggaacagatagagtcaggaatggcattgc 9319 Query: 346 tgattatggtagaaatgtgcttgcgaaaaaatccagttcgaataatactttaggagataa 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9318 tgattatggtagaaatgtgcttgcgaaaaaatccagttcgaataatactttaggagataa 9259 Query: 406 gtctcatgatagcagttcaaagggacaatcccggtccaggtcaagatctcggtcgcgatc 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9258 gtctcatgatagcagttcaaagggacaatcccggtccaggtcaagatctcggtcgcgatc 9199 Query: 466 tcaatctattatcggcggcggtgcatgcgatacaaacagcttgaagcataaggtggtcag 525 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 9198 tcaatctattatcggcggcggtgcaggcgatacaaacagcttgaagcataaggtggtcag 9139 Query: 526 cactttacatagaagatgaagcgaattgtctttgcatagcagcacgtctaatgcatctga 585 |||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 9138 cactttacatagaagaggaagcgaattgtctttgcaaagcagcacgtctaaggcatctga 9079 Query: 586 gatactgaaaaccgccaaaaagtcaagacttcggctcagccgattatttagagcttcaag 645 || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 9078 gaaactgaaaaccgccaaaaagtcaggacttcggctcagccgattatttagagcttcaag 9019 Query: 646 tacgtcttcttcattcaatgaacccactagtagttaagcccataagttcatttccagtag 705 |||||||||||||| ||| ||||||||||||||| | ||| ||||||||||| | |||| Sbjct: 9018 tacgtcttcttcatccaaggaacccactagtagtaaggccaataagttcattccaggtag 8959 Query: 706 atcgagggctggttc-ttgaaaaaaacagtgtttgatttatatgaccattttcctgtacc 764 ||||||||||||||| ||||||||| ||||||| ||||||||||||| |||||||||| Sbjct: 8958 atcgagggctggttctttgaaaaaaccagtgttgaatttatatgacca-tttcctgtaca 8900 Query: 765 cgattgtaggtcttgattattttggacgacgaaaaccatgatgac 809 ||| || |||||||| || ||||||||||||| || |||||||| Sbjct: 8899 cgaatgagggtcttga-taatttggacgacgaagacgatgatgac 8856 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7680 Number of Sequences: 1807 Number of extensions: 7680 Number of successful extensions: 62 Number of sequences better than 1.0e-20: 1 length of query: 945 length of database: 10,358,551 effective HSP length: 16 effective length of query: 929 effective length of database: 10,329,639 effective search space: 9596234631 effective search space used: 9596234631 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)