BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FJ0AC36ZA09FM1.SCF screened BAC_end
(982 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1707 1197 0.0
>3x_Contig1707
Length = 16216
Score = 1197 bits (604), Expect = 0.0
Identities = 832/893 (93%), Gaps = 13/893 (1%)
Strand = Plus / Plus
Query: 87 aacaatgattggaaatctgttccctcacaaggtatttggtttaatatgcattacaagtgc 146
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 13698 aacaatgattggaaatctgttccctcacaaggtatttggtttaatatgcagtacaagtgc 13757
Query: 147 tcgatatagtctttgagcgtattatcttcatcttcattttcgatatctacaatagtaaat 206
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13758 tcgatatagtctttgtgcgtattatcttcatcttcattttcgatatctacaatagtaaat 13817
Query: 207 cggcgtaacatcttgattttataaaattgactctgaactgtctttaagcttagtgatgat 266
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 13818 cggcgtaacatcttgattttagaaaattgactctgaactgtctttaagcttagtgatgat 13877
Query: 267 atgttattgtagttactgtacgctacggtaccaaaatctggaaattctttaaggctgttt 326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13878 atgttattgtagttactgtacgctacggtaccaaaatctggaaattctttaaggctgttt 13937
Query: 327 tcaatgtcttcgatggtcgttatgagagtactgttcgtgacatcactggtacactgtaaa 386
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 13938 tcaatgtcttcgatggtcgttatgagagtactgttcgtgacatcagtggtacactgtaaa 13997
Query: 387 caagaaaaatgtgaccattgaaacctgaattttaacttcgtagaaagaggttttgatagc 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13998 caagaaaaatgtgaccattgaaacctgaattttaacttcgtagaaagaggttttgatagc 14057
Query: 447 agcatttcataccatctaactatctttctctgtaatttattacgttgcgattcaagttca 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14058 agcatttcataccatctaactatctttctctgtaatttattacgttgcgattcaagttca 14117
Query: 507 ttgtatttttgcccctgcgcctttttattagcaagatcggtacagatatctcccatcata 566
||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 14118 ttgtatttttgcccctgcgcctttttattagcaagatcgttacagatatttcccatcata 14177
Query: 567 tgcgtcatgatttcaaaaattgatacagctattgaaacaggtgattcattcggagatggt 626
| ||||||||||||||||||||||||||||||||||||| |||||||| || |||||||
Sbjct: 14178 tttgtcatgatttcaaaaattgatacagctattgaaacagttgattcatccgtagatggt 14237
Query: 627 tctatcatttgatagagattcacttctatggccattgatgaaaattccaccacctgatta 686
|||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||
Sbjct: 14238 tctatcatttgatagagattcacttctatggccattgagaaaaattccaccacctcatac 14297
Query: 687 catgctaggactccaaatatattctgtaactaaacaagtgccgnccttctttcagttgta 746
||||| |||||||||| ||| ||||||||||||||||||||| ||||| |||||| ||
Sbjct: 14298 aatgct-ggactccaaaaataatctgtaactaaacaagtgccgt-cttctctcagtttta 14355
Query: 747 gaaatgctttgatgaatagggaaacgtacagcatgacaatgaagttttcttatgattgac 806
| ||| |||||||||| | ||||||||||||||||| ||||||| |||||||| ||||||
Sbjct: 14356 gtaattctttgatgaa-aaggaaacgtacagcatgaaaatgaag-tttcttatcattgac 14413
Query: 807 attccggaattgaaacgcctaa-gtccttcag-ctctattttcgaaagggtatttgtttg 864
|| ||| | |||||||||||| |||| |||| |||||||| ||| |||| || || |||
Sbjct: 14414 atcccgta--tgaaacgcctaacgtcc-tcagcctctatttccgagagggaatctg-ttg 14469
Query: 865 gcttttattcaccagaaaaaatactgctttgcaaaggcattgttagctgaattaaaatat 924
||| | ||||||||||| ||||||||| ||||| ||||||||||||| | ||||||
Sbjct: 14470 gctctacatcaccagaaaacatactgcttcgcaaaagcattgttagctg-agtaaaatca 14528
Query: 925 tccgtggaatcctttgactggnaaattttccggacacttgcttgaaaaattcc 977
||||| | |||||||||||| ||||||||| ||| ||||||||| |||||||
Sbjct: 14529 tccgttg-atcctttgactgaaaaattttcctgac-cttgcttgagaaattcc 14579
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7668
Number of Sequences: 1807
Number of extensions: 7668
Number of successful extensions: 63
Number of sequences better than 1.0e-20: 1
length of query: 982
length of database: 10,358,551
effective HSP length: 16
effective length of query: 966
effective length of database: 10,329,639
effective search space: 9978431274
effective search space used: 9978431274
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)