BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC36ZA09RM1.SCF screened BAC_end
         (971 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig705                                                         1193   0.0  

>3x_Contig705 
          Length = 3163

 Score = 1193 bits (602), Expect = 0.0
 Identities = 803/859 (93%), Gaps = 9/859 (1%)
 Strand = Plus / Plus

                                                                        
Query: 44   ctttgggaagttctgaaattgacattttgttgcctgtagatttaaactttgcgaggcata 103
            ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||
Sbjct: 497  ctttgggaagttctgaaattgacaagttgttgcctgtagatttaaactttgcgaggcata 556

                                                                        
Query: 104  tcagaactttcaataacactgccgaaaaggttgaatgggctcatatggttgatttaaata 163
            ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 557  tcagaactttcaataacactgccgaaaaggttgaatgggctcatatggttgatgtaaata 616

                                                                        
Query: 164  gtaatatggataatttcaatgaattggttccaaacccagcaagaacatggccatttgttt 223
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |
Sbjct: 617  gtaatatggataatttcaatgaattggttccaaacccagcaagaacatggccatttgaat 676

                                                                        
Query: 224  tatatacgtttcaaaaggaagcagtttaccatttagaacagggcgactctgtatttgttg 283
            || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677  tagatacgtttcaaaaggaagcagtttaccatttagaacagggcgactctgtatttgttg 736

                                                                        
Query: 284  ctgcccatacatcatcaggtaagactgttgttgccgaatacgctatcgcaatgtctaaaa 343
            |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 737  ctgcccatacatcagcaggtaagactgttgttgccgaatacg-tatcgcaatgtctaaaa 795

                                                                        
Query: 344  gaaatatgactaaaactatctacacttcacctatcaaagccttatcgaaccaaaagttca 403
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796  gaaatatgactaaaactatctacacttcacctatcaaagccttatcgaaccaaaagttca 855

                                                                        
Query: 404  gagattttaaagaagattttgacgacgtcgatgtatgtttaataacaggggatgtacaaa 463
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 856  gagattttaaagaagattttgacgacgtcgatgtaggtttaataacaggggatgtacaaa 915

                                                                        
Query: 464  tcaacccataagcagactgcttgattatgaccaccgaaatcttaagatcaatgttatatc 523
            |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 916  tcaacccagaagcagactgcttgattatgaccaccgaaatcttaagatcaatgttatatc 975

                                                                        
Query: 524  gaggagcagatctaatcagagacgtggaatntgttatctttgatgaagttcattacgtga 583
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 976  gaggagcagatctaatcagagacgtggaatttgttatctttgatgaagttcattacgtga 1035

                                                                        
Query: 584  atgatcaaacgcgtggtgtggtttgggaaagaatcattatcatgcttnctc-acatgtta 642
            |||||||||||||||||||||||||||||  | |||||||||||||| ||| ||||||||
Sbjct: 1036 atgatcaaacgcgtggtgtggtttgggaagaagtcattatcatgcttcctcaacatgtta 1095

                                                                        
Query: 643  aattcattctactatcgcctactgntccgaatactttcgaatttgcaaattgggtgggtt 702
            ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| 
Sbjct: 1096 aattcattctactatcggctactgttccgaatactttcgaatttgcaaattgggtgggta 1155

                                                                        
Query: 703  agacccaacaaagaaacatttatttcatattcacccctaaacgaactggtccactaagaa 762
              ||| ||||||  ||||| ||| |||||| ||||||||||||| |||  ||||||   |
Sbjct: 1156 gaaccaaacaaaagaacatctatgtcatatccacccctaaacgacctgtcccactagaga 1215

                                                                        
Query: 763  taaatttttgggccaaaaaagaaagttatttcagtggattaacgttaaaagaaagtttct 822
            ||||| | |||| ||||||||||||| ||  |||| ||| |||| ||||||| || ||||
Sbjct: 1216 taaatatatggg-caaaaaagaaagtaataccagt-gataaacgataaaagagag-ttct 1272

                                                                        
Query: 823  taccccaaaactt-agaaaacacaaaaaaactattaactgcctcttaaattcgggttttt 881
            ||||||||||||| ||| ||||| ||  ||||| | |||||||||| || ||||| | ||
Sbjct: 1273 taccccaaaacttcagagaacac-aaggaactacttactgcctcttcaa-tcggg-tctt 1329

                               
Query: 882  ccaaaaactcacttaaaaa 900
            |||||||||||| ||||||
Sbjct: 1330 ccaaaaactcacctaaaaa 1348


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8320
Number of Sequences: 1807
Number of extensions: 8320
Number of successful extensions: 55
Number of sequences better than 1.0e-20: 1
length of query: 971
length of database: 10,358,551
effective HSP length: 16
effective length of query: 955
effective length of database: 10,329,639
effective search space: 9864805245
effective search space used: 9864805245
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)