BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC36ZA09RM1.SCF screened BAC_end (971 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig705 1193 0.0 >3x_Contig705 Length = 3163 Score = 1193 bits (602), Expect = 0.0 Identities = 803/859 (93%), Gaps = 9/859 (1%) Strand = Plus / Plus Query: 44 ctttgggaagttctgaaattgacattttgttgcctgtagatttaaactttgcgaggcata 103 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 497 ctttgggaagttctgaaattgacaagttgttgcctgtagatttaaactttgcgaggcata 556 Query: 104 tcagaactttcaataacactgccgaaaaggttgaatgggctcatatggttgatttaaata 163 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 557 tcagaactttcaataacactgccgaaaaggttgaatgggctcatatggttgatgtaaata 616 Query: 164 gtaatatggataatttcaatgaattggttccaaacccagcaagaacatggccatttgttt 223 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 617 gtaatatggataatttcaatgaattggttccaaacccagcaagaacatggccatttgaat 676 Query: 224 tatatacgtttcaaaaggaagcagtttaccatttagaacagggcgactctgtatttgttg 283 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 677 tagatacgtttcaaaaggaagcagtttaccatttagaacagggcgactctgtatttgttg 736 Query: 284 ctgcccatacatcatcaggtaagactgttgttgccgaatacgctatcgcaatgtctaaaa 343 |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 737 ctgcccatacatcagcaggtaagactgttgttgccgaatacg-tatcgcaatgtctaaaa 795 Query: 344 gaaatatgactaaaactatctacacttcacctatcaaagccttatcgaaccaaaagttca 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 796 gaaatatgactaaaactatctacacttcacctatcaaagccttatcgaaccaaaagttca 855 Query: 404 gagattttaaagaagattttgacgacgtcgatgtatgtttaataacaggggatgtacaaa 463 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 856 gagattttaaagaagattttgacgacgtcgatgtaggtttaataacaggggatgtacaaa 915 Query: 464 tcaacccataagcagactgcttgattatgaccaccgaaatcttaagatcaatgttatatc 523 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 916 tcaacccagaagcagactgcttgattatgaccaccgaaatcttaagatcaatgttatatc 975 Query: 524 gaggagcagatctaatcagagacgtggaatntgttatctttgatgaagttcattacgtga 583 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 976 gaggagcagatctaatcagagacgtggaatttgttatctttgatgaagttcattacgtga 1035 Query: 584 atgatcaaacgcgtggtgtggtttgggaaagaatcattatcatgcttnctc-acatgtta 642 ||||||||||||||||||||||||||||| | |||||||||||||| ||| |||||||| Sbjct: 1036 atgatcaaacgcgtggtgtggtttgggaagaagtcattatcatgcttcctcaacatgtta 1095 Query: 643 aattcattctactatcgcctactgntccgaatactttcgaatttgcaaattgggtgggtt 702 ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| Sbjct: 1096 aattcattctactatcggctactgttccgaatactttcgaatttgcaaattgggtgggta 1155 Query: 703 agacccaacaaagaaacatttatttcatattcacccctaaacgaactggtccactaagaa 762 ||| |||||| ||||| ||| |||||| ||||||||||||| ||| |||||| | Sbjct: 1156 gaaccaaacaaaagaacatctatgtcatatccacccctaaacgacctgtcccactagaga 1215 Query: 763 taaatttttgggccaaaaaagaaagttatttcagtggattaacgttaaaagaaagtttct 822 ||||| | |||| ||||||||||||| || |||| ||| |||| ||||||| || |||| Sbjct: 1216 taaatatatggg-caaaaaagaaagtaataccagt-gataaacgataaaagagag-ttct 1272 Query: 823 taccccaaaactt-agaaaacacaaaaaaactattaactgcctcttaaattcgggttttt 881 ||||||||||||| ||| ||||| || ||||| | |||||||||| || ||||| | || Sbjct: 1273 taccccaaaacttcagagaacac-aaggaactacttactgcctcttcaa-tcggg-tctt 1329 Query: 882 ccaaaaactcacttaaaaa 900 |||||||||||| |||||| Sbjct: 1330 ccaaaaactcacctaaaaa 1348 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8320 Number of Sequences: 1807 Number of extensions: 8320 Number of successful extensions: 55 Number of sequences better than 1.0e-20: 1 length of query: 971 length of database: 10,358,551 effective HSP length: 16 effective length of query: 955 effective length of database: 10,329,639 effective search space: 9864805245 effective search space used: 9864805245 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)