BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC36ZB01FM1.SCF screened BAC_end
         (967 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig586                                                         1289   0.0  

>3x_Contig586 
          Length = 2500

 Score = 1289 bits (650), Expect = 0.0
 Identities = 705/718 (98%), Gaps = 4/718 (0%)
 Strand = Plus / Minus

                                                                        
Query: 90   cggtaatattggttatggtttgaacgttgagcaaagaaagaagttatcaattgctgttga 149
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1013 cggtaatattggttatggtttgaacgttgagcaaagaaagaagttatcaattgctgttga 954

                                                                        
Query: 150  attggttgccaaaccgaacttgttgttgtttttggacgaaccaacttctggtttagattc 209
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 953  attggttgccaaaccgaacttgttgttgtttttggacgaaccaacttctggtttagattc 894

                                                                        
Query: 210  tcaatctgcctgggccattgttcagttgttgaagaaattagccggcgccggtcaatcaat 269
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 893  tcaatctgcctgggccattgttcagttgttgaagaaattagccggcgccggtcaatcaat 834

                                                                        
Query: 270  tttgtgtaccatccatcaaccttctgctactttgttcgaagaattcgacagattgttatt 329
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 833  tttgtgtaccatccatcaaccttctgctactttgttcgaagaattcgacagattgttatt 774

                                                                        
Query: 330  attgcgtaaaggtggtcaaactgtgtactttggtgacatcggtgaacactcttctacgtt 389
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773  attgcgtaaaggtggtcaaactgtgtactttggtgacatcggtgaacactcttctacgtt 714

                                                                        
Query: 390  gttatcatactttgagagaaatggtgcacgtaggtgtgaagaaaaggaaaatccggccga 449
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713  gttatcatactttgagagaaatggtgcacgtaggtgtgaagaaaaggaaaatccggccga 654

                                                                        
Query: 450  gtatattttggaagccattggtgccggtgctacagcttccgttaaggaagattggcacga 509
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653  gtatattttggaagccattggtgccggtgctacagcttccgttaaggaagattggcacga 594

                                                                        
Query: 510  aaaatggattaaatcatcagaatttgtttctgttaaccaagaaatcaacgacttaatcga 569
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593  aaaatggattaaatcatcagaatttgtttctgttaaccaagaaatcaacgacttaatcga 534

                                                                        
Query: 570  aaagctagcccaccaaccaaatgacgattcttccactgaattgattactaaatatgctac 629
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533  aaagctagcccaccaaccaaatgacgattcttccactgaattgattactaaatatgctac 474

                                                                        
Query: 630  accatattggtaccaattcgtttatgttttaagacggaccatggttatgtttctggagag 689
            ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 473  accatattggtaccaattcgtttatgttttaagacggaccatggttatg-ttctggagag 415

                                                                        
Query: 690  atgtggactacttaatggctaagaccctgttgtatatcaccaatggttttgttaatgggt 749
            |||||||||||||||||||||||||| |||||||||||| || ||| |||||| || |||
Sbjct: 414  atgtggactacttaatggctaagaccatgttgtatatcagcagtgg-tttgttcatcggt 356

                                                                      
Query: 750  ttcaccttctattatgtgggtactttctttcgtcgggctaccaatatgcgatggttgc 807
            |||||||||||| |||||||||| |||||||||||| ||| ||| |||||||| ||||
Sbjct: 355  ttcaccttctataatgtgggtac-ttctttcgtcggtcta-caaaatgcgatgtttgc 300


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8281
Number of Sequences: 1807
Number of extensions: 8281
Number of successful extensions: 52
Number of sequences better than 1.0e-20: 1
length of query: 967
length of database: 10,358,551
effective HSP length: 16
effective length of query: 951
effective length of database: 10,329,639
effective search space: 9823486689
effective search space used: 9823486689
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)