BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC36ZB01FM1.SCF screened BAC_end (967 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig586 1289 0.0 >3x_Contig586 Length = 2500 Score = 1289 bits (650), Expect = 0.0 Identities = 705/718 (98%), Gaps = 4/718 (0%) Strand = Plus / Minus Query: 90 cggtaatattggttatggtttgaacgttgagcaaagaaagaagttatcaattgctgttga 149 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1013 cggtaatattggttatggtttgaacgttgagcaaagaaagaagttatcaattgctgttga 954 Query: 150 attggttgccaaaccgaacttgttgttgtttttggacgaaccaacttctggtttagattc 209 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 953 attggttgccaaaccgaacttgttgttgtttttggacgaaccaacttctggtttagattc 894 Query: 210 tcaatctgcctgggccattgttcagttgttgaagaaattagccggcgccggtcaatcaat 269 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 893 tcaatctgcctgggccattgttcagttgttgaagaaattagccggcgccggtcaatcaat 834 Query: 270 tttgtgtaccatccatcaaccttctgctactttgttcgaagaattcgacagattgttatt 329 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 833 tttgtgtaccatccatcaaccttctgctactttgttcgaagaattcgacagattgttatt 774 Query: 330 attgcgtaaaggtggtcaaactgtgtactttggtgacatcggtgaacactcttctacgtt 389 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 773 attgcgtaaaggtggtcaaactgtgtactttggtgacatcggtgaacactcttctacgtt 714 Query: 390 gttatcatactttgagagaaatggtgcacgtaggtgtgaagaaaaggaaaatccggccga 449 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 gttatcatactttgagagaaatggtgcacgtaggtgtgaagaaaaggaaaatccggccga 654 Query: 450 gtatattttggaagccattggtgccggtgctacagcttccgttaaggaagattggcacga 509 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 653 gtatattttggaagccattggtgccggtgctacagcttccgttaaggaagattggcacga 594 Query: 510 aaaatggattaaatcatcagaatttgtttctgttaaccaagaaatcaacgacttaatcga 569 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 593 aaaatggattaaatcatcagaatttgtttctgttaaccaagaaatcaacgacttaatcga 534 Query: 570 aaagctagcccaccaaccaaatgacgattcttccactgaattgattactaaatatgctac 629 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 533 aaagctagcccaccaaccaaatgacgattcttccactgaattgattactaaatatgctac 474 Query: 630 accatattggtaccaattcgtttatgttttaagacggaccatggttatgtttctggagag 689 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 473 accatattggtaccaattcgtttatgttttaagacggaccatggttatg-ttctggagag 415 Query: 690 atgtggactacttaatggctaagaccctgttgtatatcaccaatggttttgttaatgggt 749 |||||||||||||||||||||||||| |||||||||||| || ||| |||||| || ||| Sbjct: 414 atgtggactacttaatggctaagaccatgttgtatatcagcagtgg-tttgttcatcggt 356 Query: 750 ttcaccttctattatgtgggtactttctttcgtcgggctaccaatatgcgatggttgc 807 |||||||||||| |||||||||| |||||||||||| ||| ||| |||||||| |||| Sbjct: 355 ttcaccttctataatgtgggtac-ttctttcgtcggtcta-caaaatgcgatgtttgc 300 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8281 Number of Sequences: 1807 Number of extensions: 8281 Number of successful extensions: 52 Number of sequences better than 1.0e-20: 1 length of query: 967 length of database: 10,358,551 effective HSP length: 16 effective length of query: 951 effective length of database: 10,329,639 effective search space: 9823486689 effective search space used: 9823486689 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)